RNA–Protein interactions for RNA: ENST00000554129.1

LINC01588-208, Transcript of long intergenic non-protein coding RNA 1588, human

TSL 2 BASIC

Gene LINC01588, Length 2,301 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01588-208	ENST00000554129	ZNF302	Q9NR11	478 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	KRT82	Q9NSB4	513 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	RNF186	Q9NXI6	227 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	MGAM	O43451	1857 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	NOP56	O00567	594 aa	Known RBP	11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	DNAJC6	O75061	913 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	IGHA2	P01877	340 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	GSTT1	P30711	240 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	RGS2	P41220	211 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	SERPINB4	P48594	390 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	STAT5B	P51692	787 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	MAPK6	Q16659	721 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	ODR4	Q5SWX8	454 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	ACAD10	Q6JQN1	1059 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	TRIM50	Q86XT4	487 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	SYCP3	Q8IZU3	236 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	ZNF276	Q8N554	614 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	TMEM174	Q8WUU8	243 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	WDR60	Q8WVS4	1066 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	SOCS4	Q8WXH5	440 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	SHC3	Q92529	594 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	STMN2	Q93045	179 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	DDX27	Q96GQ7	796 aa	Known RBP	11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	ANKEF1	Q9NU02	776 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	KCND2	Q9NZV8	630 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	ANAPC7	Q9UJX3	599 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	GABRQ	Q9UN88	632 aa		11.15	□□□□□ -0.62
LINC01588-208	ENST00000554129	CFAP69	A5D8W1	941 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129		A8MXQ7	604 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	PMM2	O15305	246 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	CYP11B1	P15538	503 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	SMPD1	P17405	629 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	SLC1A1	P43005	524 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	FCGRT	P55899	365 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	PTP4A2	Q12974	167 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	P3H1	Q32P28	736 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	WDR72	Q3MJ13	1102 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	KBTBD2	Q8IY47	623 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	RFWD2	Q8NHY2	731 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	DTX3L	Q8TDB6	740 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	MCUR1	Q96AQ8	359 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	CEP170P1	Q96L14	293 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	APBA2	Q99767	749 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	LARS	Q9P2J5	1176 aa	Known RBP	11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	HEY2	Q9UBP5	337 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	SLC24A2	Q9UI40	661 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	DCTN4	Q9UJW0	460 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	SLC4A7	Q9Y6M7	1214 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129		A0A1W2PPM1	405 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	DKC1	O60832	514 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	PYGL	P06737	847 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	LYN	P07948	512 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	RALA	P11233	206 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	PLS3	P13797	630 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	FLT3LG	P49771	235 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	SP3	Q02447	781 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	KRT72	Q14CN4	511 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	DUSP28	Q4G0W2	176 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	LRRC23	Q53EV4	343 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	XKR3	Q5GH77	459 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	DAB2IP	Q5VWQ8	1189 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	VPS52	Q8N1B4	723 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	MAK16	Q9BXY0	300 aa	Known RBP	11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	TAS2R1	Q9NYW7	299 aa		11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC01588-208	ENST00000554129	UMODL1	Q5DID0	1318 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	CETN2	P41208	172 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	MFAP3	P55082	362 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	LAMC2	Q13753	1193 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	CNPY1	Q3B7I2	92 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	OLFML2B	Q68BL8	750 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	IQSEC1	Q6DN90	963 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	RINL	Q6ZS11	566 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	AFG1L	Q8WV93	481 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	DDX1	Q92499	740 aa	Known RBP	11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	SKA1	Q96BD8	255 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	FAM81B	Q96LP2	452 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	SPATA16	Q9BXB7	569 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	HEMGN	Q9BXL5	484 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	CFHR5	Q9BXR6	569 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	TRIM55	Q9BYV6	548 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	TMEM117	Q9H0C3	514 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	VCX3B	Q9H321	246 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	VCX3A	Q9NNX9	186 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	GPRC5C	Q9NQ84	441 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	CYP26B1	Q9NR63	512 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	DNALI1	O14645	258 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	LGR5	O75473	907 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	OAT	P04181	439 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	KRT4	P19013	534 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	ADRA1D	P25100	572 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	MXI1	P50539	228 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	RAP1GDS1	P52306	607 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	SOX10	P56693	466 aa		11.13	□□□□□ -0.63
LINC01588-208	ENST00000554129	PRKCZ	Q05513	592 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms