RNA–Protein interactions for RNA: ENST00000554116.5

TUBB3-204, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-204ENST00000554116 FAM213AQ9BRX8 229 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 ADAM33Q9BZ11 813 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 TPSD1Q9BZJ3 242 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 RNF38Q9H0F5 515 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 TMEM206Q9H813 350 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 TRPC7Q9HCX4 862 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 CRTAC1Q9NQ79 661 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 TMEM30AQ9NV96 361 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 MORC2Q9Y6X9 1032 aaPredicted RBP12.39□□□□□ -0.43
TUBB3-204ENST00000554116 CEP192Q8TEP8 1941 aa12.39□□□□□ -0.43
TUBB3-204ENST00000554116 GOLGA8IPA6NC78 632 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 GOLGA8JA6NMD2 632 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 TBCAO75347 108 aaKnown RBP12.38□□□□□ -0.43
TUBB3-204ENST00000554116 USP17L7P0C7H9 530 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 ZSCAN22P10073 491 aaPredicted RBP12.38□□□□□ -0.43
TUBB3-204ENST00000554116 SLC6A11P48066 632 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 NASPP49321 788 aaPredicted RBP12.38□□□□□ -0.43
TUBB3-204ENST00000554116 DGKEP52429 567 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 FOXC1Q12948 553 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 ELF2Q15723 593 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 DAB2IPQ5VWQ8 1189 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 TMEM86AQ8N2M4 240 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 LRRC52Q8N7C0 313 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 MDGA1Q8NFP4 955 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 OR5B17Q8NGF7 314 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 GATA6Q92908 595 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 ATP2A3Q93084 1043 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 HVCN1Q96D96 273 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 FNBP1Q96RU3 617 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 CBWD1Q9BRT8 395 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 PANK2Q9BZ23 570 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 PDE11AQ9HCR9 933 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 TBC1D7Q9P0N9 293 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 STK17AQ9UEE5 414 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 ARHGAP26Q9UNA1 814 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 SNX9Q9Y5X1 595 aa12.38□□□□□ -0.43
TUBB3-204ENST00000554116 SETXQ7Z333 2677 aaKnown RBP12.37□□□□□ -0.43
TUBB3-204ENST00000554116 A0A087X0B3 334 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 TRAV19A0A0A6YYK7 116 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 FRMD3A2A2Y4 597 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 SPTLC2O15270 562 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 PPP6R2O75170 966 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 RHOBTB1O94844 696 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 CKMP06732 381 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 HDCP19113 662 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 PNPLA4P41247 253 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 MAGEA11P43364 429 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 IFNAR2P48551 515 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 CACNA2D1P54289 1103 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 SEC13P55735 322 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 RPL10AP62906 217 aaKnown RBP12.37□□□□□ -0.43
TUBB3-204ENST00000554116 AMPD2Q01433 879 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 POSTNQ15063 836 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 FOXD4L6Q3SYB3 417 aaPredicted RBP12.37□□□□□ -0.43
TUBB3-204ENST00000554116 C2orf27AQ580R0 203 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 L1TD1Q5T7N2 865 aaKnown RBP12.37□□□□□ -0.43
TUBB3-204ENST00000554116 SH3PXD2AQ5TCZ1 1133 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 EMC10Q5UCC4 262 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 LMBRD2Q68DH5 695 aaPredicted RBP12.37□□□□□ -0.43
TUBB3-204ENST00000554116 FOXD4L3Q6VB84 417 aaPredicted RBP12.37□□□□□ -0.43
TUBB3-204ENST00000554116 SV2BQ7L1I2 683 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 C12orf40Q86WS4 652 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 ADGRG2Q8IZP9 1017 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 CCDC33Q8N5R6 958 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 CSGALNACT2Q8N6G5 542 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 TOP6BLQ8N6T0 577 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 GLIS3Q8NEA6 775 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 TTC16Q8NEE8 873 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 FUBP3Q96I24 572 aaKnown RBP eCLIP12.37□□□□□ -0.43
TUBB3-204ENST00000554116 CNOT6LQ96LI5 555 aaKnown RBP12.37□□□□□ -0.43
TUBB3-204ENST00000554116 TTLL2Q9BWV7 592 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 MTMR12Q9C0I1 747 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 TMEM74BQ9NUR3 256 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 UXTQ9UBK9 157 aaPredicted RBP12.37□□□□□ -0.43
TUBB3-204ENST00000554116 MBD1Q9UIS9 605 aaPredicted RBP12.37□□□□□ -0.43
TUBB3-204ENST00000554116 HCN2Q9UL51 889 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 MMP17Q9ULZ9 603 aa12.37□□□□□ -0.43
TUBB3-204ENST00000554116 A0A0A0MRY4 1105 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 SGK1O00141 431 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 LEFTY2O00292 366 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 SCAMP3O14828 347 aaKnown RBP12.36□□□□□ -0.43
TUBB3-204ENST00000554116 KALRNO60229 2985 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 HUS1O60921 280 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 ADAM23O75077 832 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 OLFM2O95897 454 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 F13A1P00488 732 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 CYP17A1P05093 508 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 CSRP1P21291 193 aaKnown RBP12.36□□□□□ -0.43
TUBB3-204ENST00000554116 GARTP22102 1010 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 BDNFP23560 247 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 GBP1P32455 592 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 ABCD1P33897 745 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 HOXD13P35453 343 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 PSMC1P62191 440 aaKnown RBP12.36□□□□□ -0.43
TUBB3-204ENST00000554116 MYL7Q01449 175 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 PSMD2Q13200 908 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 CRY1Q16526 586 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 ANO7Q6IWH7 933 aa12.36□□□□□ -0.43
TUBB3-204ENST00000554116 RHBDF2Q6PJF5 856 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms