RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ARNTLO00327 626 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 ZNF263O14978 683 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 MEFVO15553 781 aaPredicted RBP12.14□□□□□ -0.47
TMEM116-218ENST00000552839 GJA1P17302 382 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 PMLP29590 882 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 HOXC13P31276 330 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 ATICP31939 592 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 CNR2P34972 360 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 UBXN1Q04323 297 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 NCAPHQ15003 741 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 EXOC3L4Q17RC7 722 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 N4BP2L1Q5TBK1 243 aaPredicted RBP12.14□□□□□ -0.47
TMEM116-218ENST00000552839 CYP4A22Q5TCH4 519 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 HEATR6Q6AI08 1181 aaKnown RBP12.14□□□□□ -0.47
TMEM116-218ENST00000552839 SCARA5Q6ZMJ2 495 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 MFSD6LQ8IWD5 586 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 FAM160A2Q8N612 972 aaPredicted RBP12.14□□□□□ -0.47
TMEM116-218ENST00000552839 APPL2Q8NEU8 664 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 ZSCAN18Q8TBC5 510 aaPredicted RBP12.14□□□□□ -0.47
TMEM116-218ENST00000552839 DEPDC1BQ8WUY9 529 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 DDX1Q92499 740 aaKnown RBP12.14□□□□□ -0.47
TMEM116-218ENST00000552839 TAF4BQ92750 862 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 NT5C1BQ96P26 610 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 TRPV4Q9HBA0 871 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 C2orf42Q9NWW7 574 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 CEP72Q9P209 647 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 NXF1Q9UBU9 619 aaKnown RBP12.14□□□□□ -0.47
TMEM116-218ENST00000552839 LIMA1Q9UHB6 759 aaKnown RBP12.14□□□□□ -0.47
TMEM116-218ENST00000552839 SNX9Q9Y5X1 595 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 EML5Q05BV3 1969 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 ATG2BQ96BY7 2078 aa12.14□□□□□ -0.47
TMEM116-218ENST00000552839 HEPACAM2A8MVW5 462 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 KPNA7A9QM74 516 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 TM4SF5O14894 197 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 PAPSS2O95340 614 aaPredicted RBP12.13□□□□□ -0.47
TMEM116-218ENST00000552839 MYL4P12829 197 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 ATP1A3P13637 1013 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 ZNF18P17022 549 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 SOX9P48436 509 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 UBASH3AP57075 661 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 MYL6P60660 151 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 YWHAEP62258 255 aaKnown RBP12.13□□□□□ -0.47
TMEM116-218ENST00000552839 NOP14P78316 857 aaKnown RBP12.13□□□□□ -0.47
TMEM116-218ENST00000552839 CLDN10P78369 228 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 FANCCQ00597 558 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 LRMPQ12912 555 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 MRPL58Q14197 206 aaKnown RBP12.13□□□□□ -0.47
TMEM116-218ENST00000552839 ZBTB6Q15916 424 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 SGSM1Q2NKQ1 1148 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 WDR72Q3MJ13 1102 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 CBWD6Q4V339 395 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 CBWD3Q5JTY5 395 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 CBWD5Q5RIA9 395 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 IQCEQ6IPM2 695 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 Q6ZS52 159 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 LONP2Q86WA8 852 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 IRF2BP1Q8IU81 584 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 TAS1R2Q8TE23 839 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 ZNF516Q92618 1163 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 ZNF512Q96ME7 567 aaPredicted RBP12.13□□□□□ -0.47
TMEM116-218ENST00000552839 INTS2Q9H0H0 1204 aaKnown RBP12.13□□□□□ -0.47
TMEM116-218ENST00000552839 RAB20Q9NX57 234 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 FBXL5Q9UKA1 691 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 DSEQ9UL01 958 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 CFAP47Q6ZTR5 3102 aa12.13□□□□□ -0.47
TMEM116-218ENST00000552839 CNOT1A5YKK6 2376 aaKnown RBP12.12□□□□□ -0.47
TMEM116-218ENST00000552839 LGALS16A8MUM7 142 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 H7C4K7 107 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 CYB561D2O14569 222 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 PPEF2O14830 753 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 SYN3O14994 580 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 FOXD2O60548 495 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-218ENST00000552839 C4BPAP04003 597 aaKnown RBP12.12□□□□□ -0.47
TMEM116-218ENST00000552839 EPHA5P54756 1037 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 MLLT6P55198 1093 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-218ENST00000552839 TWF1Q12792 350 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 SF3A2Q15428 464 aaKnown RBP12.12□□□□□ -0.47
TMEM116-218ENST00000552839 TEAD2Q15562 447 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 TPGS2Q68CL5 300 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 IL31Q6EBC2 164 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 CEP68Q76N32 757 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 ELMOD1Q8N336 334 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 PPM1KQ8N3J5 372 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 RSPRY1Q96DX4 576 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 CRACR2AQ9BSW2 395 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 PI4K2AQ9BTU6 479 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 LSM14BQ9BX40 385 aaKnown RBP12.12□□□□□ -0.47
TMEM116-218ENST00000552839 TRIM5Q9C035 493 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 NIF3L1Q9GZT8 377 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 SNX25Q9H3E2 840 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 RXFP3Q9NSD7 469 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 SIX4Q9UIU6 781 aa12.12□□□□□ -0.47
TMEM116-218ENST00000552839 NUP210Q8TEM1 1887 aaPredicted RBP12.12□□□□□ -0.47
TMEM116-218ENST00000552839 USP24Q9UPU5 2620 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 CACNA1GO43497 2377 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 ANO9A1A5B4 782 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 GTPBP10A4D1E9 387 aaKnown RBP12.11□□□□□ -0.47
TMEM116-218ENST00000552839 GOLGA6L3A6NEY3 463 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 SLC38A8A6NNN8 435 aa12.11□□□□□ -0.47
TMEM116-218ENST00000552839 PIRO00625 290 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms