RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 E9PMD0 336 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 CYB561D2O14569 222 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 AP5Z1O43299 807 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 DKK1O94907 266 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 SPTA1P02549 2419 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 PRB1P04280 392 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 GUCY2CP25092 1073 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 CDC25AP30304 524 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 SLC6A11P48066 632 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 ZNF33AQ06730 810 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 STRN3Q13033 797 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 PDIA5Q14554 519 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 SAFBQ15424 915 aaKnown RBP eCLIP12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 EMC10Q5UCC4 262 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 SDHAF4Q5VUM1 108 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 WSCD1Q658N2 575 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 JADE1Q6IE81 842 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 TMPRSS7Q7RTY8 843 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 TTC30AQ86WT1 665 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 DCP1BQ8IZD4 617 aaKnown RBP12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 THEM5Q8N1Q8 247 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 LEO1Q8WVC0 666 aaPredicted RBP12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 HMGB4Q8WW32 186 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 CRELD1Q96HD1 420 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 UBL7Q96S82 380 aaPredicted RBP12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 TIPINQ9BVW5 301 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 KCNG1Q9UIX4 513 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 ARHGAP26Q9UNA1 814 aa12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 MAGED2Q9UNF1 606 aaPredicted RBP12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 APOBEC2Q9Y235 224 aaKnown RBP12.24□□□□□ -0.45
SUPT16H-202ENST00000552829 COL6A6A6NMZ7 2263 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 A0A1W2PQD8 194 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 C2orf78A6NCI8 922 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 OGTO15294 1046 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 PRPF40AO75400 957 aaKnown RBP12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 CYP17A1P05093 508 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 CKMP06732 381 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 SYPP08247 313 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 TIE1P35590 1138 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 EIF2DP41214 584 aaKnown RBP12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 TNFRSF4P43489 277 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 ZNF174Q15697 407 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 DDR2Q16832 855 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 EOGTQ5NDL2 527 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 SLC36A4Q6YBV0 504 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 METTL23Q86XA0 190 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 SLC41A1Q8IVJ1 513 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 NAXDQ8IW45 347 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 CD302Q8IX05 232 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 ADGRG2Q8IZP9 1017 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 PHTF2Q8N3S3 785 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 DEFB119Q8N690 84 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 ARL14EPQ8N8R7 260 aaPredicted RBP12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 IGSF22Q8N9C0 903 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 PNKPQ96T60 521 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 PKMYT1Q99640 499 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 RPF1Q9H9Y2 349 aaKnown RBP12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 TRPC7Q9HCX4 862 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 ABCB6Q9NP58 842 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 LRWD1Q9UFC0 647 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 DNM3Q9UQ16 869 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 DERAQ9Y315 318 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 PCDHB9Q9Y5E1 797 aa12.23□□□□□ -0.45
SUPT16H-202ENST00000552829 A0A0B4J269 797 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 KAT7O95251 611 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 PIGRP01833 764 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 HSP90AA1P07900 732 aaKnown RBP12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 NFICP08651 508 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 PLS3P13797 630 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 PLA2G2AP14555 144 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 RPL6Q02878 288 aaKnown RBP12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 NFE2Q16621 373 aaPredicted RBP12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 KCNK18Q7Z418 384 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 NSUN7Q8NE18 718 aaKnown RBP12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 PYM1Q9BRP8 204 aaKnown RBP12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 PI4K2AQ9BTU6 479 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 CD248Q9HCU0 757 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 TOR4AQ9NXH8 423 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 BCCIPQ9P287 314 aaKnown RBP eCLIP12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 CPSF3Q9UKF6 684 aaKnown RBP12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 PCOLCE2Q9UKZ9 415 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 MGAQ8IWI9 3026 aa12.22□□□□□ -0.45
SUPT16H-202ENST00000552829 HECTD1Q9ULT8 2610 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 IGHV1OR15-9A0A0B4J2B8 117 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 TCRBV21S2A2A0A5A6 115 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 MYMKA6NI61 221 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 ATXN7O15265 892 aaPredicted RBP12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 APODP05090 189 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 PFKLP17858 780 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 GABRG2P18507 467 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 HDCP19113 662 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 CYP2F1P24903 491 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 TAF6P49848 677 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 SMTNP53814 917 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 RPL10AP62906 217 aaKnown RBP12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 CYP4F3Q08477 520 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 TMEM132DQ14C87 1099 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 DHCR24Q15392 516 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 RHBDF2Q6PJF5 856 aa12.21□□□□□ -0.45
SUPT16H-202ENST00000552829 C12orf40Q86WS4 652 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms