RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 PRELID2Q8N945 189 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 AENQ8WTP8 325 aaKnown RBP10.35□□□□□ -0.75
TMEM116-216ENST00000552800 PPP1R13LQ8WUF5 828 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 APBB2Q92870 758 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 NT5C3BQ969T7 300 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 GAD1Q99259 594 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 ADAM2Q99965 735 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 ACBD6Q9BR61 282 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 DUSP16Q9BY84 665 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 FRMD8P1Q9BZ68 369 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-216ENST00000552800 TRIM7Q9C029 511 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 EPC1Q9H2F5 836 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 RSAD1Q9HA92 442 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 CSNK1G1Q9HCP0 422 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 ASNSD1Q9NWL6 643 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 DDX56Q9NY93 547 aaKnown RBP10.35□□□□□ -0.75
TMEM116-216ENST00000552800 FEZ2Q9UHY8 353 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-216ENST00000552800 DSEQ9UL01 958 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 TDRD15B5MCY1 1934 aaKnown RBP10.35□□□□□ -0.75
TMEM116-216ENST00000552800 HTTP42858 3142 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 MEIS3P2A8K0S8 358 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 KBTBD13C9JR72 458 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 KRIT1O00522 736 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 CYB561D2O14569 222 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 XPO1O14980 1071 aaKnown RBP10.34□□□□□ -0.75
TMEM116-216ENST00000552800 SPOPO43791 374 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 PHF2O75151 1096 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 GHRP10912 638 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 CD19P15391 556 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 LMO2P25791 158 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 GBP1P32455 592 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 PTGIRP43119 386 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 BCAT1P54687 386 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 SLC6A3Q01959 620 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 OGDHQ02218 1023 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 C2orf54Q08AI8 447 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 BST2Q10589 180 aaKnown RBP10.34□□□□□ -0.75
TMEM116-216ENST00000552800 CUL1Q13616 776 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 CCNG2Q16589 344 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 LONRF2Q1L5Z9 754 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 TJAP1Q5JTD0 557 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 PMF1Q6P1K2 205 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 DNAJC24Q6P3W2 148 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 SYDE1Q6ZW31 735 aaPredicted RBP10.34□□□□□ -0.75
TMEM116-216ENST00000552800 SLC26A9Q7LBE3 791 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 PASD1Q8IV76 773 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 ANKLE1Q8NAG6 615 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 HDAC7Q8WUI4 952 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 SUSD3Q96L08 255 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 SENP8Q96LD8 212 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 ZFP42Q96MM3 310 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 PKMYT1Q99640 499 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 CNPY3Q9BT09 278 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 TRPV6Q9H1D0 765 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 PRDM16Q9HAZ2 1276 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 PNPLA8Q9NP80 782 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 TMEM161AQ9NX61 479 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 KLK14Q9P0G3 267 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 CDH9Q9ULB4 789 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 MTUS1Q9ULD2 1270 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 DRG1Q9Y295 367 aaKnown RBP10.34□□□□□ -0.75
TMEM116-216ENST00000552800 SLC27A5Q9Y2P5 690 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 NEU2Q9Y3R4 380 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 NR2E1Q9Y466 385 aa10.34□□□□□ -0.75
TMEM116-216ENST00000552800 GOLGA6L10A0A0M3HER8 536 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 C3orf70A6NLC5 250 aaPredicted RBP10.33□□□□□ -0.76
TMEM116-216ENST00000552800 A8MXQ7 604 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 ENPP3O14638 875 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 RRP9O43818 475 aaKnown RBP10.33□□□□□ -0.76
TMEM116-216ENST00000552800 OAZ2O95190 189 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 EFEMP2O95967 443 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 KRT7P08729 469 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 RHOXF2BP0C7M4 288 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 PTPN1P18031 435 aaKnown RBP10.33□□□□□ -0.76
TMEM116-216ENST00000552800 PTPN9P43378 593 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 MARCKSL1P49006 195 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 ARSEP51690 589 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 TAS2R40P59535 323 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 PSMC1P62191 440 aaKnown RBP10.33□□□□□ -0.76
TMEM116-216ENST00000552800 SLC25A11Q02978 314 aaKnown RBP10.33□□□□□ -0.76
TMEM116-216ENST00000552800 BOLA3Q53S33 107 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 RAB41Q5JT25 222 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 GLRA4Q5JXX5 417 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 SEL1L2Q5TEA6 688 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 DUPD1Q68J44 220 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 C8orf74Q6P047 294 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 OLFML1Q6UWY5 402 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 SCARA5Q6ZMJ2 495 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 HDXQ7Z353 690 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 ACOT1Q86TX2 421 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 OSTM1Q86WC4 334 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 PSTKQ8IV42 348 aaKnown RBP10.33□□□□□ -0.76
TMEM116-216ENST00000552800 SCUBE3Q8IX30 993 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 ADGRF2Q8IZF7 708 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 TMEM130Q8N3G9 435 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 C12orf29Q8N999 325 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 B3GALNT2Q8NCR0 500 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 OR6B3Q8NGW1 331 aa10.33□□□□□ -0.76
TMEM116-216ENST00000552800 RBM41Q96IZ5 413 aaKnown RBP10.33□□□□□ -0.76
TMEM116-216ENST00000552800 BTBD6Q96KE9 485 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms