RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 PNPLA1Q8N8W4 532 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 ZSWIM2Q8NEG5 633 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 FBXO18Q8NFZ0 1043 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 HMGB4Q8WW32 186 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 KCNN1Q92952 543 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 TRMT2BQ96GJ1 504 aaKnown RBP9.12□□□□□ -0.95
CDK4-213ENST00000552713 TSPAN18Q96SJ8 248 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 FIZ1Q96SL8 496 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 REEP2Q9BRK0 252 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 GTPBP2Q9BX10 602 aaKnown RBP9.12□□□□□ -0.95
CDK4-213ENST00000552713 TMEM206Q9H813 350 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 CAPN10Q9HC96 672 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 GTF3C4Q9UKN8 822 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 L1RE1Q9UN81 338 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 LOC400499M0QZD8 3231 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 IGSF10Q6WRI0 2623 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 CELSR3Q9NYQ7 3312 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 K7ENM7 598 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 LEFTY2O00292 366 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 HDCP19113 662 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 KIR2DL1P43626 348 aaPredicted RBP9.11□□□□□ -0.95
CDK4-213ENST00000552713 NEK4P51957 841 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 ANAPC15P60006 121 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 USP46P62068 366 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 MRPS21P82921 87 aaKnown RBP9.11□□□□□ -0.95
CDK4-213ENST00000552713 NR1H3Q13133 447 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 TMEM119Q4V9L6 283 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 INTS6LQ5JSJ4 861 aaKnown RBP9.11□□□□□ -0.95
CDK4-213ENST00000552713 FILIP1Q7Z7B0 1213 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 CD302Q8IX05 232 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 ADGRG2Q8IZP9 1017 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 MINDY1Q8N5J2 469 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 WHAMMQ8TF30 809 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 LEO1Q8WVC0 666 aaPredicted RBP9.11□□□□□ -0.95
CDK4-213ENST00000552713 EXOC4Q96A65 974 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 RAB34Q9BZG1 259 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 RNF38Q9H0F5 515 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.11□□□□□ -0.95
CDK4-213ENST00000552713 RYDENQ9NUL5 291 aaKnown RBP9.11□□□□□ -0.95
CDK4-213ENST00000552713 LARSQ9P2J5 1176 aaKnown RBP9.11□□□□□ -0.95
CDK4-213ENST00000552713 UXTQ9UBK9 157 aaPredicted RBP9.11□□□□□ -0.95
CDK4-213ENST00000552713 KCNG1Q9UIX4 513 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 NOL7Q9UMY1 257 aaKnown RBP9.11□□□□□ -0.95
CDK4-213ENST00000552713 ARHGAP26Q9UNA1 814 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 DERAQ9Y315 318 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 C2CD2Q9Y426 696 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 STK24Q9Y6E0 443 aa9.11□□□□□ -0.95
CDK4-213ENST00000552713 GCN1Q92616 2671 aaKnown RBP9.1□□□□□ -0.95
CDK4-213ENST00000552713 MYLKQ15746 1914 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 TCRBV21S2A2A0A5A6 115 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 SH3BP5O60239 455 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 OPHN1O60890 802 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 ATP2C2O75185 946 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 GJB3O75712 270 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 KAT7O95251 611 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 NFATC1O95644 943 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 TCF3P15923 654 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 PAX3P23760 479 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 PRPHP41219 470 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 RPL10AP62906 217 aaKnown RBP9.1□□□□□ -0.95
CDK4-213ENST00000552713 ATP2C1P98194 919 aaPredicted RBP9.1□□□□□ -0.95
CDK4-213ENST00000552713 TSPY1Q01534 308 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 KDSRQ06136 332 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 DHX8Q14562 1220 aaKnown RBP9.1□□□□□ -0.95
CDK4-213ENST00000552713 KCNB1Q14721 858 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 DHCR24Q15392 516 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 NFE2Q16621 373 aaPredicted RBP9.1□□□□□ -0.95
CDK4-213ENST00000552713 DUOXA1Q1HG43 343 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 SV2CQ496J9 727 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 RHBDF2Q6PJF5 856 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 DTHD1Q6ZMT9 781 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 SLC41A1Q8IVJ1 513 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 SCN4BQ8IWT1 228 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 PGBD3Q8N328 593 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 PHTF2Q8N3S3 785 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 HDDC3Q8N4P3 179 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 MYCT1Q8N699 235 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 CXorf38Q8TB03 319 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 MDM1Q8TC05 714 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 HNRNPLLQ8WVV9 542 aaKnown RBP9.1□□□□□ -0.95
CDK4-213ENST00000552713 ERLEC1Q96DZ1 483 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 SPACA7Q96KW9 195 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 ACBD6Q9BR61 282 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 ASB7Q9H672 318 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 ABCB6Q9NP58 842 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 CD93Q9NPY3 652 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 DDX43Q9NXZ2 648 aaKnown RBP9.1□□□□□ -0.95
CDK4-213ENST00000552713 BCCIPQ9P287 314 aaKnown RBP eCLIP9.1□□□□□ -0.95
CDK4-213ENST00000552713 HCN2Q9UL51 889 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 SLC6A14Q9UN76 642 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 FREM2Q5SZK8 3169 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 BPTFQ12830 3046 aa9.1□□□□□ -0.95
CDK4-213ENST00000552713 LAMA5O15230 3695 aa9.09□□□□□ -0.95
CDK4-213ENST00000552713 A0A0A0MRY4 1105 aa9.09□□□□□ -0.95
CDK4-213ENST00000552713 H0Y626 953 aa9.09□□□□□ -0.95
CDK4-213ENST00000552713 H0YCG3 227 aa9.09□□□□□ -0.95
CDK4-213ENST00000552713 ARHGAP33O14559 1287 aa9.09□□□□□ -0.95
CDK4-213ENST00000552713 TRAK2O60296 914 aa9.09□□□□□ -0.95
CDK4-213ENST00000552713 ALDH1A2O94788 518 aa9.09□□□□□ -0.95
CDK4-213ENST00000552713 TRIM16O95361 564 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms