RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 FRMD5Q7Z6J6 570 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 NUP93Q8N1F7 819 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 C12orf29Q8N999 325 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 SLC22A12Q96S37 553 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 GTPBP4Q9BZE4 634 aaKnown RBP11.6□□□□□ -0.55
TMEM116-215ENST00000552374 C8orf33Q9H7E9 229 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-215ENST00000552374 APOBEC3GQ9HC16 384 aaKnown RBP11.6□□□□□ -0.55
TMEM116-215ENST00000552374 EHD2Q9NZN4 543 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 HMGXB4Q9UGU5 601 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 TCHHQ07283 1943 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 F5P12259 2224 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 ZFHX2Q9C0A1 2572 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-215ENST00000552374 ATP8B3O60423 1300 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 SOBPA7XYQ1 873 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 BIN1O00499 593 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 PSMA7O14818 248 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 STX10O60499 249 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 AP1G2O75843 785 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 CCDC130P13994 396 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 CD58P19256 250 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 ASPAP45381 313 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 NOP14P78316 857 aaKnown RBP11.6□□□□□ -0.55
TMEM116-215ENST00000552374 TAF10Q12962 218 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 ITPRIPL2Q3MIP1 535 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 COBLL1Q53SF7 1204 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 KLHL10Q6JEL2 608 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 PAQR9Q6ZVX9 377 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 ELOA2Q8IYF1 753 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-215ENST00000552374 CRYBG2Q8N1P7 616 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 SLC2A14Q8TDB8 520 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 SEMA4DQ92854 862 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 CLDN23Q96B33 292 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 CEP295NLQ96MC4 621 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 SLITRK1Q96PX8 696 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 EBF3Q9H4W6 596 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 TMEM30AQ9NV96 361 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 RAB20Q9NX57 234 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 CHMP5Q9NZZ3 219 aa11.6□□□□□ -0.55
TMEM116-215ENST00000552374 CHORDC1Q9UHD1 332 aaPredicted RBP11.6□□□□□ -0.55
TMEM116-215ENST00000552374 ZNF840PA6NDX5 716 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 SPECC1L-ADORA2AF8WAN1 911 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 GFRA3O60609 400 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 SP9P0CG40 484 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 ARSAP15289 507 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 CD44P16070 742 aaKnown RBP11.59□□□□□ -0.55
TMEM116-215ENST00000552374 TRIM21P19474 475 aaKnown RBP11.59□□□□□ -0.55
TMEM116-215ENST00000552374 YWHAQP27348 245 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 ADORA2BP29275 332 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 NBL1P41271 181 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 MAGEA9P43362 315 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 RPS9P46781 194 aaKnown RBP11.59□□□□□ -0.55
TMEM116-215ENST00000552374 MXI1P50539 228 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 MLLT6P55198 1093 aaPredicted RBP11.59□□□□□ -0.55
TMEM116-215ENST00000552374 MAP3K7CLP57077 242 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 CSTF1Q05048 431 aaKnown RBP11.59□□□□□ -0.55
TMEM116-215ENST00000552374 LRRC63Q05C16 580 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 ENPEPQ07075 957 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 MTAPQ13126 283 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 PON2Q15165 354 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 ZNF394Q53GI3 561 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 WDR44Q5JSH3 913 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 FAM35AQ86V20 835 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 UNC93AQ86WB7 457 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 RALGPS2Q86X27 583 aaPredicted RBP11.59□□□□□ -0.55
TMEM116-215ENST00000552374 FUKQ8N0W3 1084 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 FBXL13Q8NEE6 735 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 SCAMP5Q8TAC9 235 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 TATDN2Q93075 761 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 SMARCD1Q96GM5 515 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 DHTKD1Q96HY7 919 aaPredicted RBP11.59□□□□□ -0.55
TMEM116-215ENST00000552374 FAM83CQ9BQN1 747 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 TTLL2Q9BWV7 592 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 NT5C1AQ9BXI3 368 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 NIF3L1Q9GZT8 377 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 KIF9Q9HAQ2 790 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 CYP3A43Q9HB55 503 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 FAM49BQ9NUQ9 324 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 DUS2Q9NX74 493 aaKnown RBP11.59□□□□□ -0.55
TMEM116-215ENST00000552374 GCNT4Q9P109 453 aa11.59□□□□□ -0.55
TMEM116-215ENST00000552374 ARMCX3Q9UH62 379 aaPredicted RBP11.59□□□□□ -0.55
TMEM116-215ENST00000552374 TSC2P49815 1807 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 VPS13AQ96RL7 3174 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 USP34Q70CQ2 3546 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 COL4A3Q01955 1670 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 OTOL1A6NHN0 477 aaPredicted RBP11.58□□□□□ -0.56
TMEM116-215ENST00000552374 RTN3O95197 1032 aaPredicted RBP11.58□□□□□ -0.56
TMEM116-215ENST00000552374 CTHP32929 405 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 ANP32AP39687 249 aaKnown RBP11.58□□□□□ -0.56
TMEM116-215ENST00000552374 PPP3CCP48454 512 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 PDE6CP51160 858 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 RUNX3Q13761 415 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 ZNF268Q14587 947 aaPredicted RBP11.58□□□□□ -0.56
TMEM116-215ENST00000552374 MTF1Q14872 753 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 CAMK4Q16566 473 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 TXNDC11Q6PKC3 985 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 TSSK4Q6SA08 328 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 MAML2Q8IZL2 1156 aaPredicted RBP11.58□□□□□ -0.56
TMEM116-215ENST00000552374 ZNF687Q8N1G0 1237 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 RIN3Q8TB24 985 aa11.58□□□□□ -0.56
TMEM116-215ENST00000552374 SH3RF2Q8TEC5 729 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms