RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 WNT16Q9UBV4 365 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 ARMCX3Q9UH62 379 aaPredicted RBP6.29□□□□□ -1.4
CCDC65-204ENST00000552188 ZMYM5Q9UJ78 669 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 CTNND2Q9UQB3 1225 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 BDP1A6H8Y1 2624 aa6.29□□□□□ -1.4
CCDC65-204ENST00000552188 SLC38A8A6NNN8 435 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 ANHXE9PGG2 379 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 ZNF263O14978 683 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 SLC16A3O15427 465 aaKnown RBP6.28□□□□□ -1.4
CCDC65-204ENST00000552188 HCRTO43612 131 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 ECI2O75521 394 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 VNN1O95497 513 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 VNN2O95498 520 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 GNA14O95837 355 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 ABL1P00519 1130 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 CCDC192P0DO97 292 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 ATF6P18850 670 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 CD58P19256 250 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 BDNFP23560 247 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 DDX6P26196 483 aaKnown RBP eCLIP6.28□□□□□ -1.4
CCDC65-204ENST00000552188 AVPR1AP37288 418 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 CCR2P41597 374 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 MAGEA11P43364 429 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 GPR15P49685 360 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 EPHA5P54756 1037 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 STX17P56962 302 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 YWHAEP62258 255 aaKnown RBP6.28□□□□□ -1.4
CCDC65-204ENST00000552188 NOP14P78316 857 aaKnown RBP6.28□□□□□ -1.4
CCDC65-204ENST00000552188 GPC5P78333 572 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 CLDN10P78369 228 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 CYP4F8P98187 520 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 IFRD2Q12894 506 aaPredicted RBP6.28□□□□□ -1.4
CCDC65-204ENST00000552188 PAK1Q13153 545 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 NR6A1Q15406 480 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 CFAP221Q4G0U5 840 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 ZCWPW2Q504Y3 356 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 FAM78AQ5JUQ0 283 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 SDHAF4Q5VUM1 108 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 SCARA3Q6AZY7 606 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 TANGO2Q6ICL3 276 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 SPOPLQ6IQ16 392 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 FAM171BQ6P995 826 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 VSTM1Q6UX27 236 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 FILIP1Q7Z7B0 1213 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 ACOT1Q86TX2 421 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 TTC39CQ8N584 583 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 FBXL13Q8NEE6 735 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 SPATA20Q8TB22 786 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 SHKBP1Q8TBC3 707 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 KBTBD7Q8WVZ9 684 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 SMARCD2Q92925 531 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 IRF7Q92985 503 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 ELSPBP1Q96BH3 223 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 ELMO3Q96BJ8 720 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 PCED1BQ96HM7 432 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 CEP63Q96MT8 703 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 IPO9Q96P70 1041 aaKnown RBP6.28□□□□□ -1.4
CCDC65-204ENST00000552188 PRRX2Q99811 253 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 NUP62CLQ9H1M0 184 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 DNAJC25Q9H1X3 360 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 TASP1Q9H6P5 420 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 SMYD3Q9H7B4 428 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 VRTNQ9H8Y1 702 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 TRPC7Q9HCX4 862 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 C11orf16Q9NQ32 467 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 THG1LQ9NWX6 298 aaKnown RBP6.28□□□□□ -1.4
CCDC65-204ENST00000552188 RAB20Q9NX57 234 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 TRPM5Q9NZQ8 1165 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 DACH1Q9UI36 760 aa6.28□□□□□ -1.4
CCDC65-204ENST00000552188 PATJQ8NI35 1801 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 HEPACAM2A8MVW5 462 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 NCAM2O15394 837 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 RTN3O95197 1032 aaPredicted RBP6.27□□□□□ -1.41
CCDC65-204ENST00000552188 ASS1P00966 412 aaKnown RBP6.27□□□□□ -1.41
CCDC65-204ENST00000552188 USP17L7P0C7H9 530 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 PSMC3P17980 439 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 AVPR2P30518 371 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 GDI1P31150 447 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 VIPR2P41587 438 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 PDE6CP51160 858 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 KPNA1P52294 538 aaPredicted RBP6.27□□□□□ -1.41
CCDC65-204ENST00000552188 NDST1P52848 882 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 SLC8A3P57103 927 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 NLRP12P59046 1061 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 PPP3CAQ08209 521 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 ORC1Q13415 861 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 MORC3Q14149 939 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 GRM2Q14416 872 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 SLC44A4Q53GD3 710 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 PLA2G2CQ5R387 149 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 CC2D1AQ6P1N0 951 aaPredicted RBP6.27□□□□□ -1.41
CCDC65-204ENST00000552188 DENND5BQ6ZUT9 1274 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 FRMD5Q7Z6J6 570 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 UNC93AQ86WB7 457 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 TMC8Q8IU68 726 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 ARID3BQ8IVW6 561 aaPredicted RBP6.27□□□□□ -1.41
CCDC65-204ENST00000552188 MFSD6LQ8IWD5 586 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 MAB21L3Q8N8X9 362 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 STKLD1Q8NE28 680 aa6.27□□□□□ -1.41
CCDC65-204ENST00000552188 TAS1R2Q8TE23 839 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms