RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 NUSAP1Q9BXS6 441 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 CCDC113Q9H0I3 377 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 C2orf40Q9H1Z8 148 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 EBF3Q9H4W6 596 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 FBRSL1Q9HCM7 1045 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 SLC38A7Q9NVC3 462 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 THG1LQ9NWX6 298 aaKnown RBP5.86□□□□□ -1.47
HOXB3-213ENST00000552000 EBF1Q9UH73 591 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 TPCN1Q9ULQ1 816 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 MAFFQ9ULX9 164 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 KCNJ14Q9UNX9 436 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 ANAPC1Q9H1A4 1944 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 PLXND1Q9Y4D7 1925 aa5.86□□□□□ -1.47
HOXB3-213ENST00000552000 ABCA12Q86UK0 2595 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 ARID1BQ8NFD5 2236 aaPredicted RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 A0A1W2PNR3 127 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 H0Y626 953 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 FAM229AH3BQW9 127 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 TRIM16O95361 564 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 DEXIO95424 95 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 ARSAP15289 507 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 ATP2B1P20020 1258 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 DRD1P21728 446 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 MARCKSP29966 332 aaPredicted RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 PDIA3P30101 505 aaKnown RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 RDXP35241 583 aaKnown RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 ALDH1A3P47895 512 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 GALK1P51570 392 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 CDR1P51861 262 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 YARSP54577 528 aaKnown RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 LMAN2Q12907 356 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 RUNX3Q13761 415 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 TMEM259Q4ZIN3 620 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 XKR4Q5GH76 650 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 ATF7IP2Q5U623 682 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 GALNT17Q6IS24 598 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 ANO7Q6IWH7 933 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 BLOC1S2Q6QNY1 142 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 ALKAL1Q6UXT8 129 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 PIK3AP1Q6ZUJ8 805 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 SYT13Q7L8C5 426 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 DNAJB7Q7Z6W7 309 aaPredicted RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 TTC30AQ86WT1 665 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 TMEM130Q8N3G9 435 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 TTC9BQ8N6N2 239 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 ATAD1Q8NBU5 361 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 MCPH1Q8NEM0 835 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 BEST2Q8NFU1 509 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 EZH1Q92800 747 aaPredicted RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 PSMG2Q969U7 264 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 LRIG1Q96JA1 1093 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 P2RY13Q9BPV8 354 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 POLR3CQ9BUI4 534 aaPredicted RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 CCDC94Q9BW85 323 aaPredicted RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 CCDC86Q9H6F5 360 aaKnown RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 TASP1Q9H6P5 420 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 POLD4Q9HCU8 107 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 TOPORSQ9NS56 1045 aaPredicted RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 EVLQ9UI08 416 aaPredicted RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 CCL26Q9Y258 94 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 RAXQ9Y2V3 346 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 TIMM13Q9Y5L4 95 aaPredicted RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 HELZP42694 1942 aaKnown RBP5.85□□□□□ -1.47
HOXB3-213ENST00000552000 OBSL1O75147 1896 aa5.85□□□□□ -1.47
HOXB3-213ENST00000552000 CENPEQ02224 2701 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 TCHHQ07283 1943 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 ATXN2Q99700 1313 aaKnown RBP5.84□□□□□ -1.47
HOXB3-213ENST00000552000 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 MTMR11A4FU01 709 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 FAM221BA6H8Z2 402 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 CYSRT1A8MQ03 144 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 CPLX1O14810 134 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 OAZ2O95190 189 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 FGF19O95750 216 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 PRB1P04280 392 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 CFIP05156 583 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 H2AFB1P0C5Y9 115 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 H2AFB2P0C5Z0 115 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 HARSP12081 509 aaKnown RBP5.84□□□□□ -1.47
HOXB3-213ENST00000552000 KCNE1P15382 129 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 ENGP17813 658 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 WEE1P30291 646 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 RPL9P32969 192 aaKnown RBP5.84□□□□□ -1.47
HOXB3-213ENST00000552000 NAMPTP43490 491 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 AMPD2Q01433 879 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 YWHAHQ04917 246 aaPredicted RBP5.84□□□□□ -1.47
HOXB3-213ENST00000552000 SEMA3BQ13214 749 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 GPR17Q13304 367 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 ZNF423Q2M1K9 1284 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 ZNF568Q3ZCX4 644 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 FBXO43Q4G163 708 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 EARS2Q5JPH6 523 aaKnown RBP5.84□□□□□ -1.47
HOXB3-213ENST00000552000 CENPPQ6IPU0 288 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 APBB1IPQ7Z5R6 666 aaPredicted RBP5.84□□□□□ -1.47
HOXB3-213ENST00000552000 RAB44Q7Z6P3 723 aaPredicted RBP5.84□□□□□ -1.47
HOXB3-213ENST00000552000 C11orf74Q86VG3 221 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 TMEFF1Q8IYR6 380 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 HDDC3Q8N4P3 179 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 GLIS3Q8NEA6 775 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 OR2I1PQ8NGU4 316 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms