RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 PAQR9Q6ZVX9 377 aa20.18■□□□□ 0.82
DDX54-208ENST00000551344 FRMD5Q7Z6J6 570 aa20.18■□□□□ 0.82
DDX54-208ENST00000551344 NUP93Q8N1F7 819 aa20.18■□□□□ 0.82
DDX54-208ENST00000551344 TTC39CQ8N584 583 aa20.18■□□□□ 0.82
DDX54-208ENST00000551344 TRIML1Q8N9V2 468 aa20.18■□□□□ 0.82
DDX54-208ENST00000551344 USP13Q92995 863 aaPredicted RBP20.18■□□□□ 0.82
DDX54-208ENST00000551344 SMARCD1Q96GM5 515 aa20.18■□□□□ 0.82
DDX54-208ENST00000551344 MED10Q9BTT4 135 aa20.18■□□□□ 0.82
DDX54-208ENST00000551344 NT5C1AQ9BXI3 368 aa20.18■□□□□ 0.82
DDX54-208ENST00000551344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.18■□□□□ 0.822e-18■■■■■ 519.3
DDX54-208ENST00000551344 TRPM5Q9NZQ8 1165 aa20.18■□□□□ 0.82
DDX54-208ENST00000551344 COQ4Q9Y3A0 265 aa20.18■□□□□ 0.82
DDX54-208ENST00000551344 TRAV19A0A0A6YYK7 116 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 BIN1O00499 593 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 USP17L7P0C7H9 530 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 CD72P21854 359 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 MAGEA9P43362 315 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 PDE6CP51160 858 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 CACNA2D1P54289 1103 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 USP46P62068 366 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 WDR44Q5JSH3 913 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 KLHL10Q6JEL2 608 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 TTI2Q6NXR4 508 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 FAM35AQ86V20 835 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 FUKQ8N0W3 1084 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 NELFBQ8WX92 580 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 SEMA4DQ92854 862 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 MSANTD3Q96H12 275 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 DUSP9Q99956 384 aaKnown RBP20.17■□□□□ 0.82
DDX54-208ENST00000551344 SMG9Q9H0W8 520 aaKnown RBP20.17■□□□□ 0.82
DDX54-208ENST00000551344 FAM124BQ9H5Z6 455 aaPredicted RBP20.17■□□□□ 0.82
DDX54-208ENST00000551344 C8orf33Q9H7E9 229 aaPredicted RBP20.17■□□□□ 0.82
DDX54-208ENST00000551344 TMEM30AQ9NV96 361 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 KIAA1468Q9P260 1216 aa20.17■□□□□ 0.82
DDX54-208ENST00000551344 MTF2Q9Y483 593 aaPredicted RBP20.17■□□□□ 0.82
DDX54-208ENST00000551344 DENND4CQ5VZ89 1909 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 SHISA7A6NL88 538 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 LRRN2O75325 713 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 RTN3O95197 1032 aaPredicted RBP20.16■□□□□ 0.82
DDX54-208ENST00000551344 HDCP19113 662 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 DCAF17Q5H9S7 520 aaPredicted RBP20.16■□□□□ 0.82
DDX54-208ENST00000551344 CLEC17AQ6ZS10 378 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 ATOH1Q92858 354 aaPredicted RBP20.16■□□□□ 0.82
DDX54-208ENST00000551344 SLC35C1Q96A29 364 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 CLDN23Q96B33 292 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 SLITRK1Q96PX8 696 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 CYP2S1Q96SQ9 504 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 KCNK16Q96T55 309 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 TRPC7Q9HCX4 862 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 DMAP1Q9NPF5 467 aaPredicted RBP20.16■□□□□ 0.82
DDX54-208ENST00000551344 COMMD8Q9NX08 183 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 GCNT4Q9P109 453 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 HMGXB4Q9UGU5 601 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 CCL26Q9Y258 94 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 PIAS3Q9Y6X2 628 aa20.16■□□□□ 0.82
DDX54-208ENST00000551344 PTPRDP23468 1912 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 ZNF840PA6NDX5 716 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 CILPO75339 1184 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 TARSP26639 723 aaKnown RBP20.15■□□□□ 0.82
DDX54-208ENST00000551344 YWHAQP27348 245 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 TAF10Q12962 218 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 CAMK4Q16566 473 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 CBWD6Q4V339 395 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 CBWD3Q5JTY5 395 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 CBWD5Q5RIA9 395 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 C12orf29Q8N999 325 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 SLC2A14Q8TDB8 520 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 FAM3CQ92520 227 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 ZFYVE19Q96K21 471 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 HNRNPABQ99729 332 aaKnown RBP20.15■□□□□ 0.82
DDX54-208ENST00000551344 FAM83CQ9BQN1 747 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 CSNK1G1Q9HCP0 422 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 GKN1Q9NS71 199 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 IL37Q9NZH6 218 aa20.15■□□□□ 0.82
DDX54-208ENST00000551344 NUP210Q8TEM1 1887 aaPredicted RBP20.15■□□□□ 0.82
DDX54-208ENST00000551344 PMM2O15305 246 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 AP1G2O75843 785 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 GNA14O95837 355 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 CKMP06732 381 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 CCDC130P13994 396 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 RPS9P46781 194 aaKnown RBP20.14■□□□□ 0.81
DDX54-208ENST00000551344 KPNA1P52294 538 aaPredicted RBP20.14■□□□□ 0.81
DDX54-208ENST00000551344 PAK1Q13153 545 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 ORC1Q13415 861 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 ANGPT1Q15389 498 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 CC2D1AQ6P1N0 951 aaPredicted RBP20.14■□□□□ 0.81
DDX54-208ENST00000551344 RALGPS2Q86X27 583 aaPredicted RBP20.14■□□□□ 0.81
DDX54-208ENST00000551344 C1orf210Q8IVY1 113 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 ARL14EPQ8N8R7 260 aaPredicted RBP20.14■□□□□ 0.81
DDX54-208ENST00000551344 WHAMMQ8TF30 809 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 OVCA2Q8WZ82 227 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 CYFIP2Q96F07 1278 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 TWNKQ96RR1 684 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 SLC22A12Q96S37 553 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 KRT82Q9NSB4 513 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 GTSE1Q9NYZ3 720 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 GREB1Q4ZG55 1949 aa20.14■□□□□ 0.81
DDX54-208ENST00000551344 C2orf78A6NCI8 922 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 TNFRSF10BO14763 440 aa20.13■□□□□ 0.81
DDX54-208ENST00000551344 TCF3P15923 654 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms