RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 LIG4P49917 911 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 LILRA4P59901 499 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 PPP2R3AQ06190 1150 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 FCHO2Q0JRZ9 810 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 SPATA1Q5VX52 437 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 HEATR6Q6AI08 1181 aaKnown RBP9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 SCARA3Q6AZY7 606 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 PKN3Q6P5Z2 889 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 PRR23BQ6ZRT6 265 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 DNAJB7Q7Z6W7 309 aaPredicted RBP9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 GPBP1Q86WP2 473 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 LEMD2Q8NC56 503 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 RIN3Q8TB24 985 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 CHFRQ96EP1 664 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 SENP8Q96LD8 212 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 SLC30A3Q99726 388 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 PLEKHA5Q9HAU0 1116 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 POLR3BQ9NW08 1133 aaPredicted RBP9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 KLF15Q9UIH9 416 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 CPSF3Q9UKF6 684 aaKnown RBP9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 MAFFQ9ULX9 164 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 TBX20Q9UMR3 447 aa9.43□□□□□ -0.9
ATP2B1-207ENST00000550716 TSC2P49815 1807 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 A0A0B4J269 797 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 MYBPHLA2RUH7 354 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 OGTO15294 1046 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 CHADO15335 359 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 KRT37O76014 449 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 TYMPP19971 482 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 NMT1P30419 496 aaKnown RBP9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 CXCL12P48061 93 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 CCR3P51677 355 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 KPNA1P52294 538 aaPredicted RBP9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 ZNF131P52739 623 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 EPHB3P54753 998 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 LMNB2Q03252 620 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 RESTQ13127 1097 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 MYBPC2Q14324 1141 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 KARSQ15046 597 aaKnown RBP9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 PON2Q15165 354 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 OCLNQ16625 522 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 CCDC142Q17RM4 750 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 SLC39A12Q504Y0 691 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 ZC2HC1CQ53FD0 456 aaPredicted RBP9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 RILPL1Q5EBL4 403 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 GPR158Q5T848 1215 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 C9orf57Q5W0N0 161 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 NAIF1Q69YI7 327 aaPredicted RBP9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 SYT9Q86SS6 491 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 USP37Q86T82 979 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 LRRTM3Q86VH5 581 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 YAF2Q8IY57 180 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 KCNN1Q92952 543 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 PSMG2Q969U7 264 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 CDK5RAP3Q96JB5 506 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 GBP4Q96PP9 640 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 SEPT5Q99719 369 aaPredicted RBP9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 MSTO1Q9BUK6 570 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 FAM126AQ9BYI3 521 aaPredicted RBP9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 ATXN3LQ9H3M9 355 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 GMEB2Q9UKD1 530 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 CITO14578 2027 aa9.42□□□□□ -0.9
ATP2B1-207ENST00000550716 USP24Q9UPU5 2620 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 ANO9A1A5B4 782 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 OTOL1A6NHN0 477 aaPredicted RBP9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 PIRO00625 290 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 EXTL3O43909 919 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 ODC1P11926 461 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 PLCG1P19174 1290 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 ALDH1A3P47895 512 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 PXNP49023 591 aaPredicted RBP9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 GPR15P49685 360 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 ACOT2P49753 483 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 GSK3AP49840 483 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 SNRPNP63162 240 aaKnown RBP9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 PLD1Q13393 1074 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 CCINQ13939 588 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 SIM2Q14190 667 aaPredicted RBP9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 LAIR1Q6GTX8 287 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 TMEM150AQ86TG1 271 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 EFCAB13Q8IY85 973 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 SPEM1Q8N4L4 309 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 MYCT1Q8N699 235 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 ZSWIM2Q8NEG5 633 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 CSGALNACT1Q8TDX6 532 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 GIPC2Q8TF65 315 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 RAD54LQ92698 747 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 BORCS6Q96GS4 357 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 CHAMP1Q96JM3 812 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 IER2Q9BTL4 223 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 SLC46A2Q9BY10 475 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 ZCWPW1Q9H0M4 648 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 RPF1Q9H9Y2 349 aaKnown RBP9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 TMLHEQ9NVH6 421 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 KCND2Q9NZV8 630 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 LARSQ9P2J5 1176 aaKnown RBP9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 ODF2LQ9ULJ1 636 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 CCL26Q9Y258 94 aa9.41□□□□□ -0.9
ATP2B1-207ENST00000550716 CEP295Q9C0D2 2601 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms