RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 ZNF484Q5JVG2 852 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 CDCA2Q69YH5 1023 aaPredicted RBP4.6□□□□□ -1.67
CCDC59-204ENST00000550589 DNAJC24Q6P3W2 148 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 DRICH1Q6PGQ1 229 aaPredicted RBP4.6□□□□□ -1.67
CCDC59-204ENST00000550589 MPZL3Q6UWV2 235 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 ARHGEF18Q6ZSZ5 1173 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 C8orf86Q6ZUL3 223 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 CCDC121Q6ZUS5 278 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 MON1BQ7L1V2 547 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 POLNQ7Z5Q5 900 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 ERICH1Q86X53 443 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 C10orf67Q8IYJ2 551 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 CACNA2D3Q8IZS8 1091 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 SH2D3CQ8N5H7 860 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 DYDC1Q8WWB3 177 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 PRPF31Q8WWY3 499 aaKnown RBP4.6□□□□□ -1.67
CCDC59-204ENST00000550589 KRT35Q92764 455 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 CHMP6Q96FZ7 201 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 WNK4Q96J92 1243 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 CFAP57Q96MR6 1250 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 SPATA33Q96N06 139 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 ADPGKQ9BRR6 497 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 TRIM51Q9BSJ1 452 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 PI4K2AQ9BTU6 479 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 OSBPL8Q9BZF1 889 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 ASB7Q9H672 318 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 SYNCQ9H7C4 482 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 ACTR5Q9H9F9 607 aaPredicted RBP4.6□□□□□ -1.67
CCDC59-204ENST00000550589 IFT122Q9HBG6 1241 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.6□□□□□ -1.67
CCDC59-204ENST00000550589 INTS9Q9NV88 658 aaKnown RBP4.6□□□□□ -1.67
CCDC59-204ENST00000550589 ANAPC5Q9UJX4 755 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 KIAA1257Q9ULG3 409 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 SCAF8Q9UPN6 1271 aaKnown RBP4.6□□□□□ -1.67
CCDC59-204ENST00000550589 AGTPBP1Q9UPW5 1226 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 ADGRA3Q8IWK6 1321 aa4.6□□□□□ -1.67
CCDC59-204ENST00000550589 ZNF646O15015 1829 aaPredicted RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 A0A0G2JLL6 359 aaPredicted RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ZBTB42B2RXF5 422 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 INO80B-WBP1J3KQ70 363 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 GRIN2DO15399 1336 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 RIPK2O43353 540 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 B4GALT4O60513 344 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 CDH16O75309 829 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 RNF8O76064 485 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 HOXC6P09630 235 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 SRGAP2CP0DJJ0 459 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 HARSP12081 509 aaKnown RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ATP2A2P16615 1042 aaKnown RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 MMP8P22894 467 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 COL4A5P29400 1685 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 GBP2P32456 591 aaPredicted RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 PHBP35232 272 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 RPL21P46778 160 aaKnown RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 TFAMQ00059 246 aaKnown RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 PLCB3Q01970 1234 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 SP2Q02086 613 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 LAMTOR4Q0VGL1 99 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 PTK6Q13882 451 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 CAPSQ13938 189 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 PRKG1Q13976 671 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 STAT4Q14765 748 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 PLCB4Q15147 1175 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 PCBP1Q15365 356 aaKnown RBP eCLIP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 TRADDQ15628 312 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 TRIP4Q15650 581 aaPredicted RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 UAP1Q16222 522 aaPredicted RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ZNF568Q3ZCX4 644 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 TTC31Q49AM3 519 aaPredicted RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 TFDP3Q5H9I0 405 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ZNF667Q5HYK9 610 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 CELF3Q5SZQ8 465 aaKnown RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ATF7IP2Q5U623 682 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 MFSD5Q6N075 450 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 PPP1R21Q6ZMI0 780 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 C20orf204Q6ZNR8 217 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 TSHZ1Q6ZSZ6 1077 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 PRRT2Q7Z6L0 340 aaPredicted RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 TADA2BQ86TJ2 420 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 CCDC25Q86WR0 208 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 RHPN2Q8IUC4 686 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 RELL1Q8IUW5 271 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 GBP7Q8N8V2 638 aaPredicted RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ZSWIM2Q8NEG5 633 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 SHCBP1Q8NEM2 672 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 OLIG1Q8TAK6 271 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 MYCBPAPQ8TBZ2 947 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ASAP3Q8TDY4 903 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 FNIP1Q8TF40 1166 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ZNF473Q8WTR7 871 aaKnown RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ZBTB9Q96C00 473 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ADGRA2Q96PE1 1338 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 MMP19Q99542 508 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ACO2Q99798 780 aaKnown RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 C11orf70Q9BRQ4 267 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 TXLNGYQ9BZA5 131 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 INO80BQ9C086 356 aaPredicted RBP4.59□□□□□ -1.67
CCDC59-204ENST00000550589 LHX5Q9H2C1 402 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 CYP3A43Q9HB55 503 aa4.59□□□□□ -1.67
CCDC59-204ENST00000550589 ERVK-5Q9HDB9 667 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms