RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 C12orf50Q8NA57 414 aaPredicted RBP23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 DDX1Q92499 740 aaKnown RBP23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 ACDQ96AP0 544 aa23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 AGPAT3Q9NRZ7 376 aa23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 RXFP3Q9NSD7 469 aa23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 TRPM5Q9NZQ8 1165 aa23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 EBF1Q9UH73 591 aa23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 NME7Q9Y5B8 376 aa23.17■■□□□ 1.3
SMARCC2-210ENST00000550519 SPAG17Q6Q759 2223 aa23.16■■□□□ 1.3
SMARCC2-210ENST00000550519 TM4SF5O14894 197 aa23.16■■□□□ 1.3
SMARCC2-210ENST00000550519 TACC1O75410 805 aa23.16■■□□□ 1.3
SMARCC2-210ENST00000550519 FAM163BP0C2L3 166 aa23.16■■□□□ 1.3
SMARCC2-210ENST00000550519 AMPD3Q01432 767 aa23.16■■□□□ 1.3
SMARCC2-210ENST00000550519 DMC1Q14565 340 aa23.16■■□□□ 1.3
SMARCC2-210ENST00000550519 FAM26FQ5R3K3 315 aa23.16■■□□□ 1.3
SMARCC2-210ENST00000550519 RDH13Q8NBN7 331 aa23.16■■□□□ 1.3
SMARCC2-210ENST00000550519 MRPL45Q9BRJ2 306 aaKnown RBP23.16■■□□□ 1.3
SMARCC2-210ENST00000550519 FOXD4L1Q9NU39 408 aa23.16■■□□□ 1.3
SMARCC2-210ENST00000550519 TRIM66O15016 1216 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 NFATC1O95644 943 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 APBB3O95704 486 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 DLATP10515 647 aaKnown RBP23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 ANXA13P27216 316 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 GNL1P36915 607 aaPredicted RBP23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 NOP14P78316 857 aaKnown RBP23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 ASIC1P78348 528 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 PSMD6Q15008 389 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 IL31Q6EBC2 164 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 KIAA1958Q8N8K9 716 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 DHX58Q96C10 678 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 C8orf48Q96LL4 319 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 CGRRF1Q99675 332 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 DUSP15Q9H1R2 295 aaPredicted RBP23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 EHD2Q9NZN4 543 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 TFIP11Q9UBB9 837 aaKnown RBP23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 ANAPC1Q9H1A4 1944 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 CHD8Q9HCK8 2581 aa23.15■■□□□ 1.3
SMARCC2-210ENST00000550519 GREB1Q4ZG55 1949 aa23.14■■□□□ 1.3
SMARCC2-210ENST00000550519 ZNF840PA6NDX5 716 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 F8VP50 259 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 LEFTY2O00292 366 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 TNNI1P19237 187 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 MPLP40238 635 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 OPRD1P41143 372 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 PPP3CCP48454 512 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 SLC7A9P82251 487 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 CYP24A1Q07973 514 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 EHHADHQ08426 723 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 PSMD2Q13200 908 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 GAB4Q2WGN9 574 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 MDH1BQ5I0G3 518 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 IQUBQ8NA54 791 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 CCDC26Q8TAB7 109 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 FNBP1Q96RU3 617 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 C7orf25Q9BPX7 421 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 RNF38Q9H0F5 515 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 SNX25Q9H3E2 840 aa23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 KMT2BQ9UMN6 2715 aaPredicted RBP23.14■■□□□ 1.29
SMARCC2-210ENST00000550519 OLFM2O95897 454 aa23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 SNRPFP62306 86 aaKnown RBP23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 WDR72Q3MJ13 1102 aa23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 SHC4Q6S5L8 630 aa23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 XXYLT1Q8NBI6 393 aa23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 OR6B3Q8NGW1 331 aa23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 USP33Q8TEY7 942 aa23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 SCFD1Q8WVM8 642 aa23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 GZF1Q9H116 711 aaPredicted RBP23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 SMOC1Q9H4F8 434 aa23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 VPS45Q9NRW7 570 aa23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 TMEM30AQ9NV96 361 aa23.13■■□□□ 1.29
SMARCC2-210ENST00000550519 UBE4BO95155 1302 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 K7ELQ4 463 aaPredicted RBP23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 K7EQS6 105 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 DCLK1O15075 740 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 CLIC2O15247 247 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 CUTAO60888 179 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 YEATS4O95619 227 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 STAU1O95793 577 aaKnown RBP23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 PTPN1P18031 435 aaKnown RBP23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 CYP2J2P51589 502 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 STPG1Q5TH74 334 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 UNC13DQ70J99 1090 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 HS2ST1Q7LGA3 356 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 ADGRG2Q8IZP9 1017 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 ZNF516Q92618 1163 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 CCDC127Q96BQ5 260 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 ZNF396Q96N95 335 aaPredicted RBP23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 EML5Q05BV3 1969 aa23.12■■□□□ 1.29
SMARCC2-210ENST00000550519 OAS1P00973 400 aaKnown RBP23.11■■□□□ 1.29
SMARCC2-210ENST00000550519 CYP17A1P05093 508 aa23.11■■□□□ 1.29
SMARCC2-210ENST00000550519 CACNA2D1P54289 1103 aa23.11■■□□□ 1.29
SMARCC2-210ENST00000550519 TNNC1P63316 161 aa23.11■■□□□ 1.29
SMARCC2-210ENST00000550519 TAF10Q12962 218 aa23.11■■□□□ 1.29
SMARCC2-210ENST00000550519 ELF2Q15723 593 aa23.11■■□□□ 1.29
SMARCC2-210ENST00000550519 NELFCDQ8IXH7 590 aa23.11■■□□□ 1.29
SMARCC2-210ENST00000550519 ELOVL4Q9GZR5 314 aa23.11■■□□□ 1.29
SMARCC2-210ENST00000550519 XYLT2Q9H1B5 865 aa23.11■■□□□ 1.29
SMARCC2-210ENST00000550519 DPEP3Q9H4B8 488 aa23.11■■□□□ 1.29
SMARCC2-210ENST00000550519 MAGEF1Q9HAY2 307 aa23.11■■□□□ 1.29
SMARCC2-210ENST00000550519 CPQQ9Y646 472 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms