RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 ZNF143P52747 638 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 ATN1P54259 1190 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 YWHAHQ04917 246 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 SMARCB1Q12824 385 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 GPNMBQ14956 572 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 INTS6LQ5JSJ4 861 aaKnown RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 EFHC1Q5JVL4 640 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 CYP4A22Q5TCH4 519 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 OVOS1Q6IE37 1185 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 OR6B2Q6IFH4 312 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 CC2D1AQ6P1N0 951 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 C4orf50Q6ZRC1 276 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 SLC26A9Q7LBE3 791 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 RCOR2Q8IZ40 523 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 DCP1BQ8IZD4 617 aaKnown RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 FUKQ8N0W3 1084 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 SCML4Q8N228 414 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 TMEM130Q8N3G9 435 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 EIF1ADQ8N9N8 165 aaKnown RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 NOA1Q8NC60 698 aaKnown RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 LRRN4CLQ8ND94 238 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 C3orf58Q8NDZ4 430 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 HNRNPLLQ8WVV9 542 aaKnown RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 ALG3Q92685 438 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 BTBD6Q96KE9 485 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 FAM161BQ96MY7 647 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 DPEP3Q9H4B8 488 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 METTL5Q9NRN9 209 aaKnown RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 RNF19AQ9NV58 838 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 TMEM39AQ9NV64 488 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 EFR3BQ9Y2G0 817 aa13.22□□□□□ -0.29
CACNB3-217ENST00000550483 V9GYY5 206 aaPredicted RBP13.22□□□□□ -0.29
CACNB3-217ENST00000550483 TRIP11Q15643 1979 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 OAZ2O95190 189 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 ZRANB2O95218 330 aaKnown RBP eCLIP13.21□□□□□ -0.29
CACNB3-217ENST00000550483 ALDH2P05091 517 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 ADORA2BP29275 332 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 CHRNA3P32297 505 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 PTPN9P43378 593 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 RPL7AP62424 266 aaKnown RBP13.21□□□□□ -0.29
CACNB3-217ENST00000550483 C2orf54Q08AI8 447 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 DHX34Q14147 1143 aaKnown RBP13.21□□□□□ -0.29
CACNB3-217ENST00000550483 NFE2Q16621 373 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-217ENST00000550483 C2CD6Q53TS8 623 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 MDH1BQ5I0G3 518 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 PMF1Q6P1K2 205 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 FAM171BQ6P995 826 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 OLFML1Q6UWY5 402 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 FAM183BPQ6ZVS7 135 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 VSIG1Q86XK7 387 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 SLC13A5Q86YT5 568 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-217ENST00000550483 TDHQ8IZJ6 230 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 KRT35Q92764 455 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 MS4A14Q96JA4 679 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 GUCD1Q96NT3 240 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 CASD1Q96PB1 797 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 TBCBQ99426 244 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 MED10Q9BTT4 135 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 PARD6BQ9BYG5 372 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 UBE2OQ9C0C9 1292 aaKnown RBP13.21□□□□□ -0.29
CACNB3-217ENST00000550483 RBM12Q9NTZ6 932 aaKnown RBP13.21□□□□□ -0.29
CACNB3-217ENST00000550483 CHORDC1Q9UHD1 332 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-217ENST00000550483 FEZ2Q9UHY8 353 aaPredicted RBP13.21□□□□□ -0.29
CACNB3-217ENST00000550483 ATP11BQ9Y2G3 1177 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 MYH10P35580 1976 aa13.21□□□□□ -0.29
CACNB3-217ENST00000550483 SF3B1O75533 1304 aaKnown RBP eCLIP13.2□□□□□ -0.3
CACNB3-217ENST00000550483 OR6C75A6NL08 312 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 C2CD4BA6NLJ0 364 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 FSCN2O14926 492 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 KIAA0355O15063 1070 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 ATP8B1O43520 1251 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 HSF2BPO75031 334 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 TADA2AO75478 443 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 CCDC130P13994 396 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 TNFRSF8P28908 595 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 SDC4P31431 198 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 GBP1P32455 592 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 RFC1P35251 1148 aaPredicted RBP13.2□□□□□ -0.3
CACNB3-217ENST00000550483 SSR1P43307 286 aaKnown RBP13.2□□□□□ -0.3
CACNB3-217ENST00000550483 OR1G1P47890 313 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 FNTAP49354 379 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 DCAF12L1Q5VU92 463 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 CD300LGQ6UXG3 332 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 FAM35AQ86V20 835 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 SIX6OS1Q8N1H7 587 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 CRIPAKQ8N1N5 446 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 FUBP3Q96I24 572 aaKnown RBP eCLIP13.2□□□□□ -0.3
CACNB3-217ENST00000550483 FRMD8P1Q9BZ68 369 aaPredicted RBP13.2□□□□□ -0.3
CACNB3-217ENST00000550483 ANKZF1Q9H8Y5 726 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 LRRC4Q9HBW1 653 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 CSNK1G1Q9HCP0 422 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 CRTAC1Q9NQ79 661 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 CNGB3Q9NQW8 809 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 RRN3Q9NYV6 651 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 STIM2Q9P246 746 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 STK39Q9UEW8 545 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 RASAL2Q9UJF2 1139 aa13.2□□□□□ -0.3
CACNB3-217ENST00000550483 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-217ENST00000550483 FAM187AA6NFU0 413 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms