RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 TPI1P60174 286 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 BOLA3Q53S33 107 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 PRR5LQ6MZQ0 368 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 KAT2BQ92831 832 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 PAWRQ96IZ0 340 aaKnown RBP16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 ZNF668Q96K58 619 aaPredicted RBP16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 RIT2Q99578 217 aa16.39■□□□□ 0.21
RBFOX1-212ENST00000550418 ZNF23P17027 643 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 IFNA8P32881 189 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 SKIV2L2P42285 1042 aaKnown RBP16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 RPL10AP62906 217 aaKnown RBP16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 CYP4A22Q5TCH4 519 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 CCDC81Q6ZN84 652 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 CLVS1Q8IUQ0 354 aaPredicted RBP16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 POU5F2Q8N7G0 328 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 INPP4AQ96PE3 977 aaPredicted RBP16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 SIK2Q9H0K1 926 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 LCP1P13796 627 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 GPD1P21695 349 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 PBX1P40424 430 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 KCNK10P57789 538 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 P3H2Q8IVL5 708 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 SLC10A4Q96EP9 437 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 NIF3L1Q9GZT8 377 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 EXOSC4Q9NPD3 245 aaKnown RBP16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 SYBUQ9NX95 663 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 RPS6KL1Q9Y6S9 549 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 ARHGAP23Q9P227 1491 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 SLIT1O75093 1534 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 SERPINI2O75830 405 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 KRT36O76013 467 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 DRG2P55039 364 aaKnown RBP16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 PDK1Q15118 436 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 LACTB2Q53H82 288 aaPredicted RBP16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 SPOCD1Q6ZMY3 1216 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 SLC47A2Q86VL8 602 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 APBB2Q92870 758 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 EPAS1Q99814 870 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 ACTL7BQ9Y614 415 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 SMIM31A0A1B0GVY4 71 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 BCL10O95999 233 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 NFKBIAP25963 317 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 IREB2P48200 963 aaKnown RBP16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 BMPR2Q13873 1038 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 TNIP2Q8NFZ5 429 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 ACTL9Q8TC94 416 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 SLC16A10Q8TF71 515 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 SGF29Q96ES7 293 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 APOPT1Q96IL0 206 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 LRMDAQ9H2I8 198 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 DNAJC18Q9H819 358 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 NYAP2Q9P242 653 aa16.38■□□□□ 0.21
RBFOX1-212ENST00000550418 MSH4O15457 936 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 PSMD3O43242 534 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 OCM2P0CE71 109 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 OCMP0CE72 109 aaPredicted RBP16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 SSTR1P30872 391 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 HSD17B4P51659 736 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 CCNA1P78396 465 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 CUL2Q13617 745 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 XKR3Q5GH77 459 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 HORMAD1Q86X24 394 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 CBWD2Q8IUF1 395 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 CCNJLQ8IV13 435 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 RFWD2Q8NHY2 731 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 GCNAQ96QF7 691 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 GRIP2Q9C0E4 1043 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 GPBP1L1Q9HC44 474 aaPredicted RBP16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 CLIC5Q9NZA1 410 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 ITGB1BP2Q9UKP3 347 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 MEI4A8MW99 385 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 HNRNPCL2B2RXH8 293 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 CNTFP26441 200 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 MMP13P45452 471 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 C21orf59P57076 290 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 KCNT1Q5JUK3 1230 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 SNRNP48Q6IEG0 339 aaKnown RBP16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 CROCCP3Q8IVE0 287 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 SLC35C1Q96A29 364 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 FAM49AQ9H0Q0 323 aaPredicted RBP16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 C1orf232A0A0U1RR37 186 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 ALADP13716 330 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 PYDC1Q8WXC3 89 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 NRDE2Q9H7Z3 1164 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 MYRFQ9Y2G1 1151 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 MYO1GB0I1T2 1018 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 EXTL3O43909 919 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 H2AFYO75367 372 aaKnown RBP16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 CPA3P15088 417 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 HNRNPH3P31942 346 aaKnown RBP16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 PTGER2P43116 358 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 KRR1Q13601 381 aaKnown RBP16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 PLA2G4FQ68DD2 849 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 ZFP1Q6P2D0 407 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 KDELC2Q7Z4H8 507 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 RNF149Q8NC42 400 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 TMEM143Q96AN5 459 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 CBWD1Q9BRT8 395 aa16.37■□□□□ 0.21
RBFOX1-212ENST00000550418 NAT9Q9BTE0 207 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms