RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 CFHR4Q92496 578 aa7.04□□□□□ -1.28
TGFBR1-208ENST00000550253 RILPL2Q969X0 211 aa7.04□□□□□ -1.28
TGFBR1-208ENST00000550253 MYOCQ99972 504 aa7.04□□□□□ -1.28
TGFBR1-208ENST00000550253 STK31Q9BXU1 1019 aa7.04□□□□□ -1.28
TGFBR1-208ENST00000550253 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.04□□□□□ -1.28
TGFBR1-208ENST00000550253 BRD9Q9H8M2 597 aa7.04□□□□□ -1.28
TGFBR1-208ENST00000550253 RIC8AQ9NPQ8 531 aa7.04□□□□□ -1.28
TGFBR1-208ENST00000550253 CLIC5Q9NZA1 410 aa7.04□□□□□ -1.28
TGFBR1-208ENST00000550253 MOCS1Q9NZB8 636 aa7.04□□□□□ -1.28
TGFBR1-208ENST00000550253 SLC13A4Q9UKG4 626 aa7.04□□□□□ -1.28
TGFBR1-208ENST00000550253 CTDP1Q9Y5B0 961 aaPredicted RBP7.04□□□□□ -1.28
TGFBR1-208ENST00000550253 SCN11AQ9UI33 1791 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 NRXN2Q9P2S2 1712 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 SLC43A1O75387 559 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 HMGCRP04035 888 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 GJB1P08034 283 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 MTHFD1P11586 935 aaKnown RBP7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 IL1R2P27930 398 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 ELF1P32519 619 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 CD97P48960 835 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 TUBP50607 506 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 COPAP53621 1224 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 MLLT6P55198 1093 aaPredicted RBP7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 DDR1Q08345 913 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 EFR3AQ14156 821 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 TARBP2Q15633 366 aaKnown RBP7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 ATP2B3Q16720 1220 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 DCAF12L1Q5VU92 463 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 KIAA0408Q6ZU52 694 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 USP49Q70CQ1 688 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 FTSJ3Q8IY81 847 aaKnown RBP7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 SLC15A4Q8N697 577 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 LINC00482Q8N8I6 264 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 KYQ8NBH2 561 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 IPCEF1Q8WWN9 437 aaPredicted RBP7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 HERVK_113Q902F9 699 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 HDAC2Q92769 488 aaKnown RBP7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 LIN37Q96GY3 246 aaPredicted RBP7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 KIRREL1Q96J84 757 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 SNX27Q96L92 541 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 PYM1Q9BRP8 204 aaKnown RBP7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 KCNH6Q9H252 994 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 DHX36Q9H2U1 1008 aaKnown RBP7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 ZNF552Q9H707 407 aaPredicted RBP7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 BLOC1S4Q9NUP1 217 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 RLIMQ9NVW2 624 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 CFAP97Q9P2B7 532 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 KIF17Q9P2E2 1029 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 POLKQ9UBT6 870 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 MID2Q9UJV3 735 aa7.03□□□□□ -1.28
TGFBR1-208ENST00000550253 HOXC11O43248 304 aaPredicted RBP7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 BAIAP3O94812 1187 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 UNC5CO95185 931 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 RARBP10826 455 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 BTF3P20290 206 aaKnown RBP7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 SLC6A4P31645 630 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 POU6F2P78424 691 aaPredicted RBP7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 TMF1P82094 1093 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 EIF4A2Q14240 407 aaKnown RBP7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 FAM47AQ5JRC9 791 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 MFSD14BQ5SR56 506 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 ARL6IP4Q66PJ3 421 aaKnown RBP7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 ZNF280DQ6N043 979 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 SEM1Q6ZVN7 128 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 FRMD5Q7Z6J6 570 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 MPP5Q8N3R9 675 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 PCYOX1LQ8NBM8 494 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 CCDC150Q8NCX0 1101 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 CEP95Q96GE4 821 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 PKNOX2Q96KN3 472 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 MLXIPQ9HAP2 919 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 SLC45A1Q9Y2W3 748 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 RABGAP1Q9Y3P9 1069 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 PCDHA5Q9Y5H7 936 aa7.02□□□□□ -1.29
TGFBR1-208ENST00000550253 A6NLC8 198 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 B4E171 279 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 ASNA1O43681 348 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 CYP7B1O75881 506 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 TOX4O94842 621 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 CHRNA5P30532 468 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 TSPAN7P41732 249 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 PNLIPRP1P54315 467 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 UCP3P55916 312 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 TOMM20Q15388 145 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 C16orf54Q6UWD8 224 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 LDHDQ86WU2 507 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 HEATR4Q86WZ0 1026 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 PDSS2Q86YH6 399 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 TP53INP2Q8IXH6 220 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 RTKN2Q8IZC4 609 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 TTLL6Q8N841 843 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 OR1N1Q8NGS0 311 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 SNRNP27Q8WVK2 155 aaKnown RBP7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 ZCCHC14Q8WYQ9 949 aaKnown RBP7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 MAELQ96JY0 434 aaKnown RBP7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 NOX5Q96PH1 765 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 GPR35Q9HC97 309 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 SAYSD1Q9NPB0 183 aa7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 HERC5Q9UII4 1024 aaKnown RBP7.01□□□□□ -1.29
TGFBR1-208ENST00000550253 FEM1BQ9UK73 627 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms