RNA–Protein interactions for RNA: ENST00000550236.1

ATXN2-220, Transcript of ataxin 2, humanhuman

TSL 5

Gene ATXN2, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-220ENST00000550236 FAM3CQ92520 227 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 IRF7Q92985 503 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 USP13Q92995 863 aaPredicted RBP8.88□□□□□ -0.99
ATXN2-220ENST00000550236 TATDN2Q93075 761 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 GSDMAQ96QA5 445 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 TWNKQ96RR1 684 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 PRRX2Q99811 253 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 KCNH6Q9H252 994 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 EBF3Q9H4W6 596 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 LMAN1LQ9HAT1 526 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 TRPV4Q9HBA0 871 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 ABCB6Q9NP58 842 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 RBM12Q9NTZ6 932 aaKnown RBP8.88□□□□□ -0.99
ATXN2-220ENST00000550236 TDP1Q9NUW8 608 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 CHMP5Q9NZZ3 219 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 DLGAP2Q9P1A6 1054 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 CHORDC1Q9UHD1 332 aaPredicted RBP8.88□□□□□ -0.99
ATXN2-220ENST00000550236 HOOK1Q9UJC3 728 aaKnown RBP8.88□□□□□ -0.99
ATXN2-220ENST00000550236 CTNND2Q9UQB3 1225 aa8.88□□□□□ -0.99
ATXN2-220ENST00000550236 ARIH1Q9Y4X5 557 aaPredicted RBP8.88□□□□□ -0.99
ATXN2-220ENST00000550236 IKBKBO14920 756 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 CHADO15335 359 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 AP1G2O75843 785 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 STAU1O95793 577 aaKnown RBP8.87□□□□□ -0.99
ATXN2-220ENST00000550236 ASS1P00966 412 aaKnown RBP8.87□□□□□ -0.99
ATXN2-220ENST00000550236 CKMP06732 381 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 P4HA1P13674 534 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 HDCP19113 662 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 BMP6P22004 513 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 HOXC13P31276 330 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 ANP32AP39687 249 aaKnown RBP8.87□□□□□ -0.99
ATXN2-220ENST00000550236 MAGEA11P43364 429 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 ASPAP45381 313 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 MAP3K7CLP57077 242 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 NOP14P78316 857 aaKnown RBP8.87□□□□□ -0.99
ATXN2-220ENST00000550236 CSTF1Q05048 431 aaKnown RBP8.87□□□□□ -0.99
ATXN2-220ENST00000550236 TAF10Q12962 218 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 PON2Q15165 354 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 CBWD6Q4V339 395 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 CBWD3Q5JTY5 395 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 CBWD5Q5RIA9 395 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 NAIF1Q69YI7 327 aaPredicted RBP8.87□□□□□ -0.99
ATXN2-220ENST00000550236 TXNDC11Q6PKC3 985 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 VSTM1Q6UX27 236 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 DENND5BQ6ZUT9 1274 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 FAM35AQ86V20 835 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 MON1AQ86VX9 555 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 ADSSL1Q8N142 457 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 SCAMP5Q8TAC9 235 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 SPATA18Q8TC71 538 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 SLC2A14Q8TDB8 520 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 NELFBQ8WX92 580 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 FUBP3Q96I24 572 aaKnown RBP eCLIP8.87□□□□□ -0.99
ATXN2-220ENST00000550236 TIGD1Q96MW7 591 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 ARID3AQ99856 593 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 RNF38Q9H0F5 515 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 SMPD4Q9NXE4 827 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 UXTQ9UBK9 157 aaPredicted RBP8.87□□□□□ -0.99
ATXN2-220ENST00000550236 WNT6Q9Y6F9 365 aa8.87□□□□□ -0.99
ATXN2-220ENST00000550236 TRAV19A0A0A6YYK7 116 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 OTOL1A6NHN0 477 aaPredicted RBP8.86□□□□□ -0.99
ATXN2-220ENST00000550236 PPP1R3GB7ZBB8 358 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 SPECC1L-ADORA2AF8WAN1 911 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 ARNTLO00327 626 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 TRIM66O15016 1216 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 CALCAP01258 141 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 USP17L7P0C7H9 530 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 YWHAQP27348 245 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 PGFP49763 221 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 MXI1P50539 228 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 FKBP3Q00688 224 aaKnown RBP8.86□□□□□ -0.99
ATXN2-220ENST00000550236 FZD5Q13467 585 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 NFIL3Q16649 462 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 EDRF1Q3B7T1 1238 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 CCDC40Q4G0X9 1142 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 ARHGAP29Q52LW3 1261 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 KRT39Q6A163 491 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 CC2D1AQ6P1N0 951 aaPredicted RBP8.86□□□□□ -0.99
ATXN2-220ENST00000550236 ASCL5Q7RTU5 278 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 C1orf210Q8IVY1 113 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 FUKQ8N0W3 1084 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 NUP93Q8N1F7 819 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 CCDC150Q8NCX0 1101 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 SPATA20Q8TB22 786 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 SH3RF2Q8TEC5 729 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 DNASE1L2Q92874 299 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 FBXO32Q969P5 355 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 E2F7Q96AV8 911 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 TRMT2BQ96GJ1 504 aaKnown RBP8.86□□□□□ -0.99
ATXN2-220ENST00000550236 TNIP3Q96KP6 325 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 SPATA17Q96L03 361 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 MYRFLQ96LU7 910 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 HEXIM2Q96MH2 286 aaKnown RBP8.86□□□□□ -0.99
ATXN2-220ENST00000550236 SMOQ99835 787 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 DUSP9Q99956 384 aaKnown RBP8.86□□□□□ -0.99
ATXN2-220ENST00000550236 DDX23Q9BUQ8 820 aaKnown RBP8.86□□□□□ -0.99
ATXN2-220ENST00000550236 IMPG2Q9BZV3 1241 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 ELOVL4Q9GZR5 314 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 LINC00597Q9H2U6 94 aa8.86□□□□□ -0.99
ATXN2-220ENST00000550236 VRTNQ9H8Y1 702 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms