RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 LGALS16A8MUM7 142 aa23.87■■□□□ 1.41
BRF1-216ENST00000550208 PAEPP09466 180 aa23.87■■□□□ 1.41
BRF1-216ENST00000550208 FAM200BP0CF97 657 aa23.87■■□□□ 1.41
BRF1-216ENST00000550208 KRT5P13647 590 aa23.87■■□□□ 1.41
BRF1-216ENST00000550208 KLK7P49862 253 aa23.87■■□□□ 1.41
BRF1-216ENST00000550208 ZNF132P52740 706 aa23.87■■□□□ 1.41
BRF1-216ENST00000550208 SGO2Q562F6 1265 aa23.87■■□□□ 1.41
BRF1-216ENST00000550208 LRSAM1Q6UWE0 723 aa23.87■■□□□ 1.41
BRF1-216ENST00000550208 TMEM150AQ86TG1 271 aa23.87■■□□□ 1.41
BRF1-216ENST00000550208 TFAP2BQ92481 460 aa23.87■■□□□ 1.41
BRF1-216ENST00000550208 DUSP16Q9BY84 665 aa23.87■■□□□ 1.41
BRF1-216ENST00000550208 ZFP37Q9Y6Q3 630 aaPredicted RBP23.87■■□□□ 1.41
BRF1-216ENST00000550208 FGF19O95750 216 aa23.86■■□□□ 1.41
BRF1-216ENST00000550208 UBXN1Q04323 297 aa23.86■■□□□ 1.41
BRF1-216ENST00000550208 CLEC20AQ6ZU45 233 aa23.86■■□□□ 1.41
BRF1-216ENST00000550208 NUP93Q8N1F7 819 aa23.86■■□□□ 1.41
BRF1-216ENST00000550208 TRMT2BQ96GJ1 504 aaKnown RBP23.86■■□□□ 1.41
BRF1-216ENST00000550208 ZSWIM1Q9BR11 485 aa23.86■■□□□ 1.41
BRF1-216ENST00000550208 TSPY26PQ9H489 355 aa23.86■■□□□ 1.41
BRF1-216ENST00000550208 GDE1Q9NZC3 331 aa23.86■■□□□ 1.41
BRF1-216ENST00000550208 MYO10Q9HD67 2058 aa23.86■■□□□ 1.41
BRF1-216ENST00000550208 A0A0C4DFX4 3053 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 TNFRSF10BO14763 440 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 ASGR2P07307 311 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 CDC25CP30307 473 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 USP8P40818 1118 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 CYP4F8P98187 520 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 STXBP5Q5T5C0 1151 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 SCAMP5Q8TAC9 235 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 RSAD2Q8WXG1 361 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 SHC3Q92529 594 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 KHSRPQ92945 711 aaKnown RBP eCLIP23.85■■□□□ 1.41
BRF1-216ENST00000550208 UXTQ9UBK9 157 aaPredicted RBP23.85■■□□□ 1.41
BRF1-216ENST00000550208 SIK3Q9Y2K2 1263 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 FHOD1Q9Y613 1164 aa23.85■■□□□ 1.41
BRF1-216ENST00000550208 GREB1Q4ZG55 1949 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 MYH10P35580 1976 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 HHLA1C9JL84 531 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 FOXN3O00409 490 aaPredicted RBP23.84■■□□□ 1.41
BRF1-216ENST00000550208 TEX33O43247 280 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 NPR3P17342 541 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 BRD2P25440 801 aaKnown RBP23.84■■□□□ 1.41
BRF1-216ENST00000550208 IFRD2Q12894 506 aaPredicted RBP23.84■■□□□ 1.41
BRF1-216ENST00000550208 SYCP1Q15431 976 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 GOLGA7BQ2TAP0 167 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 GPR158Q5T848 1215 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 PARM1Q6UWI2 310 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 TTC30AQ86WT1 665 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 ANKRD52Q8NB46 1076 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 NAP1L5Q96NT1 182 aaPredicted RBP23.84■■□□□ 1.41
BRF1-216ENST00000550208 TTLL2Q9BWV7 592 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 NAA15Q9BXJ9 866 aaKnown RBP23.84■■□□□ 1.41
BRF1-216ENST00000550208 KCNK12Q9HB15 430 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 ACP6Q9NPH0 428 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 PLCB1Q9NQ66 1216 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 RTN4Q9NQC3 1192 aaKnown RBP23.84■■□□□ 1.41
BRF1-216ENST00000550208 TSPAN16Q9UKR8 245 aa23.84■■□□□ 1.41
BRF1-216ENST00000550208 ANHXE9PGG2 379 aa23.83■■□□□ 1.41
BRF1-216ENST00000550208 O00370 1275 aa23.83■■□□□ 1.41
BRF1-216ENST00000550208 TADA3O75528 432 aa23.83■■□□□ 1.41
BRF1-216ENST00000550208 UCHL3P15374 230 aa23.83■■□□□ 1.41
BRF1-216ENST00000550208 DRAP1Q14919 205 aaPredicted RBP23.83■■□□□ 1.41
BRF1-216ENST00000550208 CNGA2Q16280 664 aa23.83■■□□□ 1.41
BRF1-216ENST00000550208 GPIHBP1Q8IV16 184 aa23.83■■□□□ 1.41
BRF1-216ENST00000550208 UBA3Q8TBC4 463 aa23.83■■□□□ 1.41
BRF1-216ENST00000550208 GCNAQ96QF7 691 aa23.83■■□□□ 1.41
BRF1-216ENST00000550208 RPP25Q9BUL9 199 aaKnown RBP23.83■■□□□ 1.41
BRF1-216ENST00000550208 GPR88Q9GZN0 384 aa23.83■■□□□ 1.41
BRF1-216ENST00000550208 IL37Q9NZH6 218 aa23.83■■□□□ 1.41
BRF1-216ENST00000550208 MUTYHQ9UIF7 546 aa23.83■■□□□ 1.41
BRF1-216ENST00000550208 GOLGA6L19H0YKK7 550 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 TNFRSF10AO00220 468 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 RTN3O95197 1032 aaPredicted RBP23.82■■□□□ 1.4
BRF1-216ENST00000550208 PNMA6AP0CW24 399 aaPredicted RBP23.82■■□□□ 1.4
BRF1-216ENST00000550208 YWHAQP27348 245 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 SLC5A3P53794 718 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 TPM4P67936 248 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 TAF10Q12962 218 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 PTPN21Q16825 1174 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 ARHGAP15Q53QZ3 475 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 FAM78AQ5JUQ0 283 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 LCLAT1Q6UWP7 414 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 GPRIN1Q7Z2K8 1008 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 FGF14Q92915 247 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 PCMTD1Q96MG8 357 aaPredicted RBP23.82■■□□□ 1.4
BRF1-216ENST00000550208 ERGIC2Q96RQ1 377 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 SLC46A2Q9BY10 475 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 GANQ9H2C0 597 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 SLITRK6Q9H5Y7 841 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 TASP1Q9H6P5 420 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 FAM207AQ9NSI2 230 aaPredicted RBP23.82■■□□□ 1.4
BRF1-216ENST00000550208 EHD2Q9NZN4 543 aa23.82■■□□□ 1.4
BRF1-216ENST00000550208 TULP2O00295 520 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 EPHB6O15197 1021 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 CYP26A1O43174 497 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 PDE4CQ08493 712 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 HTR4Q13639 388 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 RAPGEF1Q13905 1077 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 FILIP1LQ4L180 1135 aa23.81■■□□□ 1.4
BRF1-216ENST00000550208 TXNDC8Q6A555 127 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms