RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 RRAGBQ5VZM2 374 aa13.11□□□□□ -0.31
DDX54-206ENST00000549271 SLFN12LQ6IEE8 588 aa13.11□□□□□ -0.31
DDX54-206ENST00000549271 FRMD1Q8N878 549 aa13.11□□□□□ -0.31
DDX54-206ENST00000549271 OR10T2Q8NGX3 314 aa13.11□□□□□ -0.31
DDX54-206ENST00000549271 C2orf15Q8WU43 125 aaKnown RBP13.11□□□□□ -0.31
DDX54-206ENST00000549271 RLN3Q8WXF3 142 aa13.11□□□□□ -0.31
DDX54-206ENST00000549271 DNAJC19Q96DA6 116 aa13.11□□□□□ -0.31
DDX54-206ENST00000549271 ZNF396Q96N95 335 aaPredicted RBP13.11□□□□□ -0.31
DDX54-206ENST00000549271 ZCWPW1Q9H0M4 648 aa13.11□□□□□ -0.31
DDX54-206ENST00000549271 HELZP42694 1942 aaKnown RBP13.11□□□□□ -0.31
DDX54-206ENST00000549271 ATXN2Q99700 1313 aaKnown RBP13.11□□□□□ -0.31
DDX54-206ENST00000549271 ANAPC1Q9H1A4 1944 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 SPTLC2O15270 562 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 PPP6R2O75170 966 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 TBCAO75347 108 aaKnown RBP13.1□□□□□ -0.31
DDX54-206ENST00000549271 F13A1P00488 732 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 PRB1P04280 392 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 CFIP05156 583 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 KRT18P05783 430 aaKnown RBP13.1□□□□□ -0.31
DDX54-206ENST00000549271 HSP90AA1P07900 732 aaKnown RBP13.1□□□□□ -0.31
DDX54-206ENST00000549271 NFICP08651 508 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 SERPINF2P08697 491 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 FTH1P19P0C7X4 201 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 PDIA4P13667 645 aaKnown RBP13.1□□□□□ -0.31
DDX54-206ENST00000549271 HMGA1P17096 107 aaKnown RBP13.1□□□□□ -0.31
DDX54-206ENST00000549271 ITPKAP23677 461 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 NLRP12P59046 1061 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 MTF1Q14872 753 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 DUOXA1Q1HG43 343 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 C2orf27AQ580R0 203 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 LYSMD4Q5XG99 296 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 TXNDC8Q6A555 127 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 TMEM92Q6UXU6 159 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 SV2BQ7L1I2 683 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 DYMQ7RTS9 669 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 MINDY1Q8N5J2 469 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 CEP76Q8TAP6 659 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 OSCP1Q8WVF1 389 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 ATP2A3Q93084 1043 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 HVCN1Q96D96 273 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 SPACA7Q96KW9 195 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 CAMK1GQ96NX5 476 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 SEPT5Q99719 369 aaPredicted RBP13.1□□□□□ -0.31
DDX54-206ENST00000549271 GTPBP2Q9BX10 602 aaKnown RBP13.1□□□□□ -0.31
DDX54-206ENST00000549271 DNAAF2Q9NVR5 837 aaKnown RBP13.1□□□□□ -0.31
DDX54-206ENST00000549271 ZNF462Q96JM2 2506 aa13.1□□□□□ -0.31
DDX54-206ENST00000549271 ANKRD63C9JTQ0 380 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 TK2O00142 265 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 MAP3K13O43283 966 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 GJB3O75712 270 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 ALDH1A2O94788 518 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 YEATS4O95619 227 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 CHRM1P11229 460 aaPredicted RBP13.09□□□□□ -0.31
DDX54-206ENST00000549271 TAF6P49848 677 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 GFPT1Q06210 699 aaPredicted RBP13.09□□□□□ -0.31
DDX54-206ENST00000549271 ZNF77Q15935 545 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 EML3Q32P44 896 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 MAP7D1Q3KQU3 841 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 FOXD4L6Q3SYB3 417 aaPredicted RBP13.09□□□□□ -0.31
DDX54-206ENST00000549271 MGAT5BQ3V5L5 792 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 ZC2HC1CQ53FD0 456 aaPredicted RBP13.09□□□□□ -0.31
DDX54-206ENST00000549271 LMBRD2Q68DH5 695 aaPredicted RBP13.09□□□□□ -0.31
DDX54-206ENST00000549271 ADALQ6DHV7 355 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 FOXD4L3Q6VB84 417 aaPredicted RBP13.09□□□□□ -0.31
DDX54-206ENST00000549271 CCDC73Q6ZRK6 1079 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 ZNF720Q7Z2F6 126 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 MON1AQ86VX9 555 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 NT5DC4Q86YG4 428 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 CCDC33Q8N5R6 958 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 PNPLA1Q8N8W4 532 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 SPPL2BQ8TCT7 592 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 WHAMMQ8TF30 809 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 GIPC2Q8TF65 315 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 CRELD1Q96HD1 420 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 UBL7Q96S82 380 aaPredicted RBP13.09□□□□□ -0.31
DDX54-206ENST00000549271 STRA6Q9BX79 667 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 ZHX3Q9H4I2 956 aa13.09□□□□□ -0.31
DDX54-206ENST00000549271 DUS2Q9NX74 493 aaKnown RBP13.09□□□□□ -0.31
DDX54-206ENST00000549271 AGO2Q9UKV8 859 aaKnown RBP13.09□□□□□ -0.31
DDX54-206ENST00000549271 MYO18AQ92614 2054 aaKnown RBP13.09□□□□□ -0.31
DDX54-206ENST00000549271 A0A087WV48 116 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 CYB561D2O14569 222 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 SH3BP5O60239 455 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 PPP1R37O75864 691 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 TXLNAP40222 546 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 OPRD1P41143 372 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 ACOT2P49753 483 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 SEC13P55735 322 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 USP4Q13107 963 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 SLC14A1Q13336 389 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 POSTNQ15063 836 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 E2F4Q16254 413 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 TAF12Q16514 161 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 SLC39A12Q504Y0 691 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 SHC4Q6S5L8 630 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 CRELD2Q6UXH1 353 aaPredicted RBP13.08□□□□□ -0.32
DDX54-206ENST00000549271 METTL23Q86XA0 190 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 SFR1Q86XK3 245 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 THEM5Q8N1Q8 247 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms