RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 INSIG1O15503 277 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 SNUPNO95149 360 aaKnown RBP5.08□□□□□ -1.6
CNOT2-216ENST00000548939 CHRM5P08912 532 aaPredicted RBP5.08□□□□□ -1.6
CNOT2-216ENST00000548939 POU2F2P09086 479 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 DLDP09622 509 aaKnown RBP5.08□□□□□ -1.6
CNOT2-216ENST00000548939 SNHG28P0DPA3 235 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 VIPR2P41587 438 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 EVA1CP58658 441 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 SATB1Q01826 763 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 LRRC41Q15345 812 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 PGS1Q32NB8 556 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 L1TD1Q5T7N2 865 aaKnown RBP5.08□□□□□ -1.6
CNOT2-216ENST00000548939 MTHFD1LQ6UB35 978 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 CRELD2Q6UXH1 353 aaPredicted RBP5.08□□□□□ -1.6
CNOT2-216ENST00000548939 SERPINA13PQ6UXR4 307 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 SLC35A4Q96G79 324 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 SNX18Q96RF0 628 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 THAP7Q9BT49 309 aaPredicted RBP5.08□□□□□ -1.6
CNOT2-216ENST00000548939 AFG3L2Q9Y4W6 797 aa5.08□□□□□ -1.6
CNOT2-216ENST00000548939 UBE2Q2LH0YL09 131 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 hCG_1984214I3L0E3 225 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 SOCS2O14508 198 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 CYP2A6P11509 494 aaPredicted RBP5.07□□□□□ -1.6
CNOT2-216ENST00000548939 IL1R2P27930 398 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 TKTP29401 623 aaKnown RBP5.07□□□□□ -1.6
CNOT2-216ENST00000548939 PDE6CP51160 858 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 NKX6-1P78426 367 aaPredicted RBP5.07□□□□□ -1.6
CNOT2-216ENST00000548939 GPR162Q16538 588 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 KHDC1LQ5JSQ8 128 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 DEPDC1Q5TB30 811 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 CATIPQ7Z7H3 387 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 SLC15A3Q8IY34 581 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 SOCS4Q8WXH5 440 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 LENG8Q96PV6 779 aaPredicted RBP5.07□□□□□ -1.6
CNOT2-216ENST00000548939 FAM118BQ9BPY3 351 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 DPCDQ9BVM2 203 aaPredicted RBP5.07□□□□□ -1.6
CNOT2-216ENST00000548939 CIPCQ9C0C6 399 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 SARS2Q9NP81 518 aaKnown RBP5.07□□□□□ -1.6
CNOT2-216ENST00000548939 XPR1Q9UBH6 696 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 PCDHA6Q9UN73 950 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 GABRQQ9UN88 632 aa5.07□□□□□ -1.6
CNOT2-216ENST00000548939 MRPS17Q9Y2R5 130 aaKnown RBP5.07□□□□□ -1.6
CNOT2-216ENST00000548939 TTBK1Q5TCY1 1321 aaPredicted RBP5.06□□□□□ -1.6
CNOT2-216ENST00000548939 WASHC2CQ9Y4E1 1318 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 MYMKA6NI61 221 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 IL33O95760 270 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 CBSLP0DN79 551 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 ATP5F1P24539 256 aaPredicted RBP5.06□□□□□ -1.6
CNOT2-216ENST00000548939 LRPAP1P30533 357 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 CBSP35520 551 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 RENBPP51606 427 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 RAPGEF1Q13905 1077 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 KLHL22Q53GT1 634 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 MRPL10Q7Z7H8 261 aaKnown RBP5.06□□□□□ -1.6
CNOT2-216ENST00000548939 PIGOQ8TEQ8 1089 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 OSCP1Q8WVF1 389 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 SCAF8Q9UPN6 1271 aaKnown RBP5.06□□□□□ -1.6
CNOT2-216ENST00000548939 MAPKBP1O60336 1514 aa5.06□□□□□ -1.6
CNOT2-216ENST00000548939 TOP2AP11388 1531 aaKnown RBP5.06□□□□□ -1.6
CNOT2-216ENST00000548939 PRG4Q92954 1404 aaPredicted RBP5.06□□□□□ -1.6
CNOT2-216ENST00000548939 TOP2BQ02880 1626 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 H3BNC9 293 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 FGBP02675 491 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 PRKCBP05771 671 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 CSF1RP07333 972 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 CCKBRP32239 447 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 ALDH5A1P51649 535 aaPredicted RBP5.05□□□□□ -1.6
CNOT2-216ENST00000548939 AMPD3Q01432 767 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 MYO1EQ12965 1108 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 ZNF268Q14587 947 aaPredicted RBP5.05□□□□□ -1.6
CNOT2-216ENST00000548939 RUSC1-AS1Q66K80 236 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 SHC4Q6S5L8 630 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 SAMD14Q8IZD0 417 aaPredicted RBP5.05□□□□□ -1.6
CNOT2-216ENST00000548939 NRACQ8N912 160 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 MTFMTQ96DP5 389 aaKnown RBP5.05□□□□□ -1.6
CNOT2-216ENST00000548939 CDK5RAP3Q96JB5 506 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 ZC3H10Q96K80 434 aaKnown RBP5.05□□□□□ -1.6
CNOT2-216ENST00000548939 GTPBP4Q9BZE4 634 aaKnown RBP5.05□□□□□ -1.6
CNOT2-216ENST00000548939 ASPSCR1Q9BZE9 553 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 CXorf36Q9H7Y0 433 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 TFCP2L1Q9NZI6 479 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 TMX2Q9Y320 296 aa5.05□□□□□ -1.6
CNOT2-216ENST00000548939 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.05□□□□□ -1.6
CNOT2-216ENST00000548939 FCHO1O14526 889 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 DSCR3O14972 297 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 FPR3P25089 353 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 ADORA2AP29274 412 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 UCP3P55916 312 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 TMEM240Q5SV17 173 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 ZNF813Q6ZN06 617 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 CELF5Q8N6W0 485 aaKnown RBP5.04□□□□□ -1.6
CNOT2-216ENST00000548939 HSPBAP1Q96EW2 488 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 MVB12AQ96EY5 273 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 EBF3Q9H4W6 596 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 TRMT13Q9NUP7 481 aaKnown RBP5.04□□□□□ -1.6
CNOT2-216ENST00000548939 ZNF580Q9UK33 172 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 FGD5Q6ZNL6 1462 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 PBRM1Q86U86 1689 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 WDR97A6NE52 1622 aa5.04□□□□□ -1.6
CNOT2-216ENST00000548939 GRIN2AQ12879 1464 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms