RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 NXF1Q9UBU9 619 aaKnown RBP15.11■□□□□ 0.01
PTCH1-217ENST00000548420 CFAP45Q9UL16 551 aa15.11■□□□□ 0.01
PTCH1-217ENST00000548420 TRAPPC3O43617 180 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 SYPP08247 313 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 HLA-EP13747 358 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 GTF2BQ00403 316 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 SEMG2Q02383 582 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 TLE3Q04726 772 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 DNM1Q05193 864 aaKnown RBP15.1■□□□□ 0.01
PTCH1-217ENST00000548420 ZNF33AQ06730 810 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 E2F4Q16254 413 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 XKR4Q5GH76 650 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 ALKAL1Q6UXT8 129 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 ZPBP2Q6X784 338 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 SV2BQ7L1I2 683 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 SETD7Q8WTS6 366 aaKnown RBP15.1■□□□□ 0.01
PTCH1-217ENST00000548420 DDX12PQ92771 950 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 SPACA7Q96KW9 195 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 PANK2Q9BZ23 570 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 CDT1Q9H211 546 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 IL21Q9HBE4 155 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 PCDHA7Q9UN72 937 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 KNL1Q8NG31 2342 aa15.1■□□□□ 0.01
PTCH1-217ENST00000548420 ZNF638Q14966 1978 aaKnown RBP15.09■□□□□ 0.01
PTCH1-217ENST00000548420 H7C4K7 107 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 TRAK2O60296 914 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 TOM1L1O75674 476 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 SOAT2O75908 522 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 FAM13AO94988 1023 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 PIGRP01833 764 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 OR4Q2P0C623 313 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 MCF2P10911 925 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 GRM5P41594 1212 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 IL12RB1P42701 662 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 MYO1EQ12965 1108 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 STRN3Q13033 797 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 BECN1Q14457 450 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 TMEM132AQ24JP5 1023 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 FOXD4L6Q3SYB3 417 aaPredicted RBP15.09■□□□□ 0.01
PTCH1-217ENST00000548420 MPZL3Q6UWV2 235 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 FOXD4L3Q6VB84 417 aaPredicted RBP15.09■□□□□ 0.01
PTCH1-217ENST00000548420 APBB1IPQ7Z5R6 666 aaPredicted RBP15.09■□□□□ 0.01
PTCH1-217ENST00000548420 SFTPA1Q8IWL2 248 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 MYCT1Q8N699 235 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 TTC9BQ8N6N2 239 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 USP13Q92995 863 aaPredicted RBP15.09■□□□□ 0.01
PTCH1-217ENST00000548420 ZBTB45Q96K62 511 aaPredicted RBP15.09■□□□□ 0.01
PTCH1-217ENST00000548420 PGLYRP2Q96PD5 576 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 STRA6Q9BX79 667 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 ECT2Q9H8V3 914 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 MAFFQ9ULX9 164 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 SRPK3Q9UPE1 567 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 DENND4CQ5VZ89 1909 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 LRRK2Q5S007 2527 aa15.09■□□□□ 0.01
PTCH1-217ENST00000548420 FRMD3A2A2Y4 597 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 E9PAM4 449 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 SYN3O14994 580 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 RRP8O43159 456 aaKnown RBP15.08■□□□□ 0
PTCH1-217ENST00000548420 ABCD1P33897 745 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 STAT6P42226 847 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 CLDN6P56747 220 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 AMPD2Q01433 879 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 MCL1Q07820 350 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 DUSP4Q13115 394 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 ZNF720Q7Z2F6 126 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 CEP120Q8N960 986 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 WHAMMQ8TF30 809 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 PSMG2Q969U7 264 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 PI4K2AQ9BTU6 479 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 HAPLN2Q9GZV7 340 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 CUEDC2Q9H467 287 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 KBTBD4Q9NVX7 518 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 SEL1LQ9UBV2 794 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 SLC27A5Q9Y2P5 690 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 GDAQ9Y2T3 454 aa15.08■□□□□ 0
PTCH1-217ENST00000548420 MYO18AQ92614 2054 aaKnown RBP15.07■□□□□ 0
PTCH1-217ENST00000548420 SGK1O00141 431 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 TBCAO75347 108 aaKnown RBP15.07■□□□□ 0
PTCH1-217ENST00000548420 PPP1R37O75864 691 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 KRT18P05783 430 aaKnown RBP15.07■□□□□ 0
PTCH1-217ENST00000548420 GP1BBP13224 206 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 NMT1P30419 496 aaKnown RBP15.07■□□□□ 0
PTCH1-217ENST00000548420 EPHB3P54753 998 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 RPL6Q02878 288 aaKnown RBP15.07■□□□□ 0
PTCH1-217ENST00000548420 GRIK2Q13002 908 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 PLEKHG6Q3KR16 790 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 ZNF568Q3ZCX4 644 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 ARHGAP15Q53QZ3 475 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 RESP18Q5W5W9 173 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 CNNM4Q6P4Q7 775 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 DBX2Q6ZNG2 339 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 DYMQ7RTS9 669 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 CMTM8Q8IZV2 173 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 PDILTQ8N807 584 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 SNIP1Q8TAD8 396 aaKnown RBP15.07■□□□□ 0
PTCH1-217ENST00000548420 TTC9Q92623 222 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 BTBD3Q9Y2F9 522 aa15.07■□□□□ 0
PTCH1-217ENST00000548420 A0A1W2PQD8 194 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 AP5Z1O43299 807 aa15.06■□□□□ 0
PTCH1-217ENST00000548420 CPB1P15086 417 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms