RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 IGDCC3Q8IVU1 814 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 NUP43Q8NFH3 380 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 PCYT2Q99447 389 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 CDADC1Q9BWV3 514 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 NT5C1AQ9BXI3 368 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 LRRCC1Q9C099 1032 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 PLEKHA4Q9H4M7 779 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 CCSER2Q9H7U1 834 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 NRDE2Q9H7Z3 1164 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 LMAN1LQ9HAT1 526 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 CHST7Q9NS84 486 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 CNOT11Q9UKZ1 510 aaKnown RBP7.55□□□□□ -1.2
CCDC59-203ENST00000548126 CDH7Q9ULB5 785 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 FRMPD4Q14CM0 1322 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 ZNF462Q96JM2 2506 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 C4orf47A7E2U8 309 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 MAN2B1O00754 1011 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 FOXP2O15409 715 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 TEX28O15482 410 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 PPP1R11O60927 126 aaPredicted RBP7.54□□□□□ -1.2
CCDC59-203ENST00000548126 EPN2O95208 641 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 C1RP00736 705 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 IGHDP01880 384 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 SPATA31D3P0C874 917 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 KCNA2P16389 499 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 CSRP1P21291 193 aaKnown RBP7.54□□□□□ -1.2
CCDC59-203ENST00000548126 KCNC1P48547 511 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 TARBP2Q15633 366 aaKnown RBP7.54□□□□□ -1.2
CCDC59-203ENST00000548126 KIZQ2M2Z5 673 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 DAB2IPQ5VWQ8 1189 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 LARP1BQ659C4 914 aaKnown RBP7.54□□□□□ -1.2
CCDC59-203ENST00000548126 SPATA31D4Q6ZUB0 917 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 GGNQ86UU5 652 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 DGKHQ86XP1 1220 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 SYT8Q8NBV8 401 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 RSPH1Q8WYR4 309 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 KXD1Q9BQD3 176 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 PHF20Q9BVI0 1012 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 LRRC3Q9BY71 257 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 AZI2Q9H6S1 392 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 HEBP1Q9NRV9 189 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 ZDHHC7Q9NXF8 308 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 NDRG2Q9UN36 371 aaKnown RBP7.54□□□□□ -1.2
CCDC59-203ENST00000548126 SSX2IPQ9Y2D8 614 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.54□□□□□ -1.2
CCDC59-203ENST00000548126 PCDHA5Q9Y5H7 936 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 CFAP46Q8IYW2 2715 aa7.54□□□□□ -1.2
CCDC59-203ENST00000548126 GREM1O60565 184 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 GPR32O75388 356 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 PAPSS2O95340 614 aaPredicted RBP7.53□□□□□ -1.2
CCDC59-203ENST00000548126 PARP1P09874 1014 aaKnown RBP7.53□□□□□ -1.2
CCDC59-203ENST00000548126 ERCC5P28715 1186 aaPredicted RBP7.53□□□□□ -1.2
CCDC59-203ENST00000548126 SLC11A1P49279 550 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 AK2P54819 239 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 EFEMP1Q12805 493 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 HEATR6Q6AI08 1181 aaKnown RBP7.53□□□□□ -1.2
CCDC59-203ENST00000548126 FBXL19Q6PCT2 694 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 ZPBP2Q6X784 338 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 PLPPR4Q7Z2D5 763 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 CACNA2D4Q7Z3S7 1137 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 SLCO6A1Q86UG4 719 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 SMC5Q8IY18 1101 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 SPEM1Q8N4L4 309 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 FGF13Q92913 245 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 MTMR8Q96EF0 704 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 CDHR1Q96JP9 859 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 RPS6KC1Q96S38 1066 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 HNRNPABQ99729 332 aaKnown RBP7.53□□□□□ -1.2
CCDC59-203ENST00000548126 BDH2Q9BUT1 245 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 PRDM14Q9GZV8 571 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 SMOC1Q9H4F8 434 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 VPS45Q9NRW7 570 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 ECHDC1Q9NTX5 307 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 TBC1D13Q9NVG8 400 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 ACSL6Q9UKU0 697 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 PCDHB14Q9Y5E9 798 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 PCDHGA5Q9Y5G8 931 aa7.53□□□□□ -1.2
CCDC59-203ENST00000548126 SALL3Q9BXA9 1300 aa7.52□□□□□ -1.2
CCDC59-203ENST00000548126 URB1O60287 2271 aaKnown RBP7.52□□□□□ -1.21
CCDC59-203ENST00000548126 BAZ2BQ9UIF8 2168 aaKnown RBP7.52□□□□□ -1.21
CCDC59-203ENST00000548126 FAM221BA6H8Z2 402 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 K7ESF4 209 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 ZBTB5O15062 677 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 ALDH2P05091 517 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 PLA2G2AP14555 144 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 HOXA6P31267 233 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 MAPKAPK2P49137 400 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 STAT5BP51692 787 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 RNASELQ05823 741 aaKnown RBP7.52□□□□□ -1.21
CCDC59-203ENST00000548126 TRAF1Q13077 416 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 ALX1Q15699 326 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 CDCP2Q5VXM1 449 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 KIAA1211LQ6NV74 962 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 WDR5BQ86VZ2 330 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 PALB2Q86YC2 1186 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 OTUD7AQ8TE49 926 aaPredicted RBP7.52□□□□□ -1.21
CCDC59-203ENST00000548126 HNRNPLLQ8WVV9 542 aaKnown RBP7.52□□□□□ -1.21
CCDC59-203ENST00000548126 GPRASP2Q96D09 838 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 LRIG1Q96JA1 1093 aa7.52□□□□□ -1.21
CCDC59-203ENST00000548126 EDEM2Q9BV94 578 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms