RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 IKZF4Q9H2S9 585 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 PDZD7Q9H5P4 517 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 FAM124BQ9H5Z6 455 aaPredicted RBP5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 PLEKHA5Q9HAU0 1116 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 IFT122Q9HBG6 1241 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 NPHS2Q9NP85 383 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 UBE2TQ9NPD8 197 aaPredicted RBP5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 FAM105AQ9NUU6 356 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 DNAJC12Q9UKB3 198 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 CPSF3Q9UKF6 684 aaKnown RBP5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 ITGA11Q9UKX5 1188 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 PIN4Q9Y237 131 aaKnown RBP5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 GINS2Q9Y248 185 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 DERAQ9Y315 318 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 C2CD2Q9Y426 696 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 CEP83Q9Y592 693 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 MROH7Q68CQ1 1323 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 ZSWIM8A7E2V4 1837 aa5.36□□□□□ -1.55
AC078880.2-201ENST00000547948 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 A0A0U1RQG5 324 aaPredicted RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 CTAGE9A4FU28 777 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 KRTAP9-7A8MTY7 169 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 RBAK-RBAKDNI3L0D1 243 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 B4GALT5O43286 388 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 LRRN2O75325 713 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 TACC1O75410 805 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 NOL4O94818 638 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 LCA5LO95447 670 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 PGK1P00558 417 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 HLA-DRAP01903 254 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ASGR1P07306 291 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 RNASE1P07998 156 aaKnown RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 GJB1P08034 283 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 USP17L7P0C7H9 530 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 STAG3L1P0CL83 205 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 CD8BP10966 210 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ACTN1P12814 892 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 KRT5P13647 590 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ARF4P18085 180 aaPredicted RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 CCND3P30281 292 aaPredicted RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ATICP31939 592 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 EIF4A3P38919 411 aaKnown RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 USP8P40818 1118 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 PNPLA4P41247 253 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 RAB27AP51159 221 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ETF1P62495 437 aaKnown RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 NOP14P78316 857 aaKnown RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 DLG4P78352 724 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 TFAMQ00059 246 aaKnown RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ARID5AQ03989 594 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 MYO1EQ12965 1108 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 DRAP1Q14919 205 aaPredicted RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 TMEM132DQ14C87 1099 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ARHGAP44Q17R89 818 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 SGSM1Q2NKQ1 1148 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ZNF699Q32M78 642 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 MARCH8Q5T0T0 291 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 CCDC122Q5T0U0 273 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 TDRD10Q5VZ19 366 aaKnown RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 WDR59Q6PJI9 974 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 NXPE4Q6UWF7 544 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 CXCL17Q6UXB2 119 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 TRIM72Q6ZMU5 477 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 DPH6Q7L8W6 267 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 RPAINQ86UA6 219 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 GALNT12Q8IXK2 581 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 THNSL1Q8IYQ7 743 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 C17orf53Q8N3J3 647 aaPredicted RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 USP38Q8NB14 1042 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 MSANTD4Q8NCY6 345 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ACRBPQ8NEB7 543 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 TRPV1Q8NER1 839 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 BEST2Q8NFU1 509 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ZNF296Q8WUU4 475 aaPredicted RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 UBE2Q2Q8WVN8 375 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 DNAJB3Q8WWF6 145 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 CTNNBL1Q8WYA6 563 aaPredicted RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 MISP3Q96FF7 219 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ZNF560Q96MR9 790 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ACAP3Q96P50 834 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 NOX5Q96PH1 765 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 PPP1R16BQ96T49 567 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 KRTAP4-5Q9BYR2 181 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 BCO2Q9BYV7 579 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 NRSN2Q9GZP1 204 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 PDCL3Q9H2J4 239 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ADAMTS10Q9H324 1103 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ACSS3Q9H6R3 686 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 PDE11AQ9HCR9 933 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 PTPRHQ9HD43 1115 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 SIX2Q9NPC8 291 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 LZTFL1Q9NQ48 299 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 C1GALT1Q9NS00 363 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 MBNL3Q9NUK0 354 aaKnown RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 SEPT11Q9NVA2 429 aaKnown RBP5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 ARHGAP20Q9P2F6 1191 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 HDAC6Q9UBN7 1215 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 INTUQ9ULD6 942 aa5.35□□□□□ -1.55
AC078880.2-201ENST00000547948 AP4E1Q9UPM8 1137 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms