RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 ATP8B3O60423 1300 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 KRBA1A5PL33 1030 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 PRAMEF12O95522 483 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 CCDC130P13994 396 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 NPR3P17342 541 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 GRIK1P39086 918 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 PPP3CCP48454 512 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 MLLT6P55198 1093 aaPredicted RBP11.6□□□□□ -0.55
GCN1-202ENST00000547263 GPC5P78333 572 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 CYP4F8P98187 520 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 PKDCCQ504Y2 493 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 GPR158Q5T848 1215 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 PHLDB3Q6NSJ2 640 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 CLEC20AQ6ZU45 233 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 ARID3BQ8IVW6 561 aaPredicted RBP11.6□□□□□ -0.55
GCN1-202ENST00000547263 MFSD6LQ8IWD5 586 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 SCN4BQ8IWT1 228 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 CMTM8Q8IZV2 173 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 KIAA1958Q8N8K9 716 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 SLC2A14Q8TDB8 520 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 DNASE1L2Q92874 299 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 CYFIP2Q96F07 1278 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 TMEM176AQ96HP8 235 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 KREMEN1Q96MU8 473 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 NT5C1BQ96P26 610 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 KCNK16Q96T55 309 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 KXD1Q9BQD3 176 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 FUCA2Q9BTY2 467 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 UBXN6Q9BZV1 441 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 EHD2Q9NZN4 543 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 TICRRQ7Z2Z1 1910 aa11.6□□□□□ -0.55
GCN1-202ENST00000547263 MYO16Q9Y6X6 1858 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 ZNF840PA6NDX5 716 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 FAM86C2PA6NEL3 165 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 RTN3O95197 1032 aaPredicted RBP11.59□□□□□ -0.55
GCN1-202ENST00000547263 OAS1P00973 400 aaKnown RBP11.59□□□□□ -0.55
GCN1-202ENST00000547263 PAEPP09466 180 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 PSMC3P17980 439 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 CD58P19256 250 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 STARD6P59095 220 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 YWHAEP62258 255 aaKnown RBP11.59□□□□□ -0.55
GCN1-202ENST00000547263 CETN1Q12798 172 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 ORC1Q13415 861 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 NCAPHQ15003 741 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 MAN2A1Q16706 1144 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 ARHGAP15Q53QZ3 475 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 PPP1R26Q5T8A7 1209 aaPredicted RBP11.59□□□□□ -0.55
GCN1-202ENST00000547263 IER5LQ5T953 404 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 CWF19L1Q69YN2 538 aaKnown RBP11.59□□□□□ -0.55
GCN1-202ENST00000547263 TRIM65Q6PJ69 517 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 ARHGEF19Q8IW93 802 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 NUP93Q8N1F7 819 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 FBXL6Q8N531 539 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 ZNF276Q8N554 614 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 RIN3Q8TB24 985 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 FAM200AQ8TCP9 573 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 KAT5Q92993 513 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 DUSP16Q9BY84 665 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 HSD3B7Q9H2F3 369 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 KIF9Q9HAQ2 790 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 SIX2Q9NPC8 291 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.59□□□□□ -0.55
GCN1-202ENST00000547263 KRT82Q9NSB4 513 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 SAMSN1Q9NSI8 373 aaKnown RBP11.59□□□□□ -0.55
GCN1-202ENST00000547263 ANO10Q9NW15 660 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 KIAA1257Q9ULG3 409 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 ARIH1Q9Y4X5 557 aaPredicted RBP11.59□□□□□ -0.55
GCN1-202ENST00000547263 USP3Q9Y6I4 520 aa11.59□□□□□ -0.55
GCN1-202ENST00000547263 LRRC10BA6NIK2 292 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 HEPACAM2A8MVW5 462 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 RNF225M0QZC1 329 aaPredicted RBP11.58□□□□□ -0.56
GCN1-202ENST00000547263 CHADO15335 359 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 AP1G2O75843 785 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 PDGFBP01127 241 aaPredicted RBP11.58□□□□□ -0.56
GCN1-202ENST00000547263 FAM200BP0CF97 657 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 ZNF18P17022 549 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 EEF1GP26641 437 aaKnown RBP11.58□□□□□ -0.56
GCN1-202ENST00000547263 ANXA13P27216 316 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 VIPR2P41587 438 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 TUBP50607 506 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 CLCN5P51795 746 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 SLC5A3P53794 718 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 PFKPQ01813 784 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 USP4Q13107 963 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 MEA1Q16626 185 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 KLHL40Q2TBA0 621 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 RAB41Q5JT25 222 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 TXNDC8Q6A555 127 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 C11orf57Q6ZUT1 292 aaPredicted RBP11.58□□□□□ -0.56
GCN1-202ENST00000547263 TTC30AQ86WT1 665 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 FAM114A1Q8IWE2 563 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 ZNF687Q8N1G0 1237 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 MRPS31Q92665 395 aaKnown RBP11.58□□□□□ -0.56
GCN1-202ENST00000547263 USP13Q92995 863 aaPredicted RBP11.58□□□□□ -0.56
GCN1-202ENST00000547263 GCNAQ96QF7 691 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 SLC22A12Q96S37 553 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 BPIFA3Q9BQP9 254 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 ZSWIM1Q9BR11 485 aa11.58□□□□□ -0.56
GCN1-202ENST00000547263 INTS2Q9H0H0 1204 aaKnown RBP11.58□□□□□ -0.56
GCN1-202ENST00000547263 FAM49BQ9NUQ9 324 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms