RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 NPR3P17342 541 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 POU3F3P20264 500 aaPredicted RBP17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 GABRB2P47870 512 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 HADHBP55084 474 aaKnown RBP17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 SNX16P57768 344 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 TJAP1Q5JTD0 557 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 DNTTIP2Q5QJE6 756 aaKnown RBP17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 SYT10Q6XYQ8 523 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 SLC35F6Q8N357 371 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 SMARCD1Q96GM5 515 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 TGS1Q96RS0 853 aaKnown RBP17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 WDR24Q96S15 920 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 HERC2P3Q9BVR0 1158 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 NUP85Q9BW27 656 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 VN1R3Q9BXE9 311 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 OSGEPQ9NPF4 335 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 ST7Q9NRC1 585 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 DNAI1Q9UI46 699 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 COG5Q9UP83 839 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 PCDHB12Q9Y5F1 795 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 PCDHGC5Q9Y5F6 944 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 SCINQ9Y6U3 715 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 MYO9BQ13459 2157 aa17.82■□□□□ 0.44
ARFGAP1-220ENST00000547204 TULP2O00295 520 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 XPO1O14980 1071 aaKnown RBP17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 SOD2P04179 222 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 ERBB2P04626 1255 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 PLA2G4AP47712 749 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 GSCP56915 257 aaPredicted RBP17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 CYP4A22Q5TCH4 519 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 PLEKHA7Q6IQ23 1121 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 PMF1Q6P1K2 205 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 C4orf50Q6ZRC1 276 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 TAS1R1Q7RTX1 841 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 DDX53Q86TM3 631 aaKnown RBP17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 LRRTM3Q86VH5 581 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 TPCN2Q8NHX9 752 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 ZNF564Q8TBZ8 553 aaPredicted RBP17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 GDPD5Q8WTR4 605 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 ATXN2LQ8WWM7 1075 aaKnown RBP17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 CLP1Q92989 425 aaKnown RBP17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 C18orf8Q96DM3 657 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 SLC4A5Q9BY07 1137 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 MRPL47Q9HD33 250 aaKnown RBP17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 CYLDQ9NQC7 956 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 PARVAQ9NVD7 372 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 TMLHEQ9NVH6 421 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 WDR35Q9P2L0 1181 aa17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 CHORDC1Q9UHD1 332 aaPredicted RBP17.81■□□□□ 0.44
ARFGAP1-220ENST00000547204 NLRC5Q86WI3 1866 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 GRID2IPA4D2P6 1211 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 TBC1D4O60343 1298 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 LPXNO60711 386 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 PALMO75781 387 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 AP1G2O75843 785 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 OR4Q2P0C623 313 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 LINC00271P0C7V0 271 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 RGS7P49802 495 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 ERVK-21P61565 698 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 SKIV2LQ15477 1246 aaKnown RBP17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 NFE2Q16621 373 aaPredicted RBP17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 SLC39A12Q504Y0 691 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 LLGL2Q6P1M3 1020 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 DNAJC24Q6P3W2 148 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 CLEC20AQ6ZU45 233 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 PHLDB2Q86SQ0 1253 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 XYLT1Q86Y38 959 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 SPATA2LQ8IUW3 424 aaPredicted RBP17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 C3orf20Q8ND61 904 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 PIK3R5Q8WYR1 880 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 ZNF592Q92610 1267 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 HSFY1Q96LI6 401 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 CHST7Q9NS84 486 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 TJP2Q9UDY2 1190 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 STK39Q9UEW8 545 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 MUC3AQ02505 3323 aa17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 COL4A4P53420 1690 aaPredicted RBP17.8■□□□□ 0.44
ARFGAP1-220ENST00000547204 TCRBV5S1A1TA0A578 114 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 E5RJQ4 531 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 CASQ1P31415 396 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 ACADSBP45954 432 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 RPL34P49207 117 aaKnown RBP17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 GLUD2P49448 558 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 MAMLD1Q13495 774 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 ZNF268Q14587 947 aaPredicted RBP17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 PSMD5Q16401 504 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 KIAA1841Q6NSI8 718 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 PRSS55Q6UWB4 352 aaPredicted RBP17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 TMEM110Q86TL2 294 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 PIGZQ86VD9 579 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 KIF18AQ8NI77 898 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 RIN2Q8WYP3 895 aaPredicted RBP17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 SMOQ99835 787 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 MTRRQ9UBK8 725 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 BACE2Q9Y5Z0 518 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 PTPRDP23468 1912 aa17.79■□□□□ 0.44
ARFGAP1-220ENST00000547204 BEST1O76090 585 aa17.78■□□□□ 0.44
ARFGAP1-220ENST00000547204 CPB1P15086 417 aa17.78■□□□□ 0.44
ARFGAP1-220ENST00000547204 BDNFP23560 247 aa17.78■□□□□ 0.44
ARFGAP1-220ENST00000547204 MAP3K7CLP57077 242 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms