RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 PPP3CCP48454 512 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 MLLT6P55198 1093 aaPredicted RBP15.7■□□□□ 0.1
CCDC38-205ENST00000546947 PLCB2Q00722 1185 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 ZNF268Q14587 947 aaPredicted RBP15.7■□□□□ 0.1
CCDC38-205ENST00000546947 KLHL10Q6JEL2 608 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 TTI2Q6NXR4 508 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 ZNF852Q6ZMS4 543 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 FRMD5Q7Z6J6 570 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 ACOT1Q86TX2 421 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 GPIHBP1Q8IV16 184 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 NUP93Q8N1F7 819 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 DTWD2Q8NBA8 298 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 CSGALNACT1Q8TDX6 532 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 NELFBQ8WX92 580 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 SEMA4DQ92854 862 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 SMARCD1Q96GM5 515 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 MSANTD3Q96H12 275 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 DUSP9Q99956 384 aaKnown RBP15.7■□□□□ 0.1
CCDC38-205ENST00000546947 FOXQ1Q9C009 403 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 DNAI2Q9GZS0 605 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 LTB4R2Q9NPC1 389 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCDC38-205ENST00000546947 TDP1Q9NUW8 608 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 THG1LQ9NWX6 298 aaKnown RBP15.7■□□□□ 0.1
CCDC38-205ENST00000546947 DLGAP2Q9P1A6 1054 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 MRPS17Q9Y2R5 130 aaKnown RBP15.7■□□□□ 0.1
CCDC38-205ENST00000546947 COQ4Q9Y3A0 265 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 PATJQ8NI35 1801 aa15.7■□□□□ 0.1
CCDC38-205ENST00000546947 TRAV19A0A0A6YYK7 116 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 BIN1O00499 593 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 RTN3O95197 1032 aaPredicted RBP15.69■□□□□ 0.1
CCDC38-205ENST00000546947 DCNP07585 359 aaKnown RBP15.69■□□□□ 0.1
CCDC38-205ENST00000546947 MAGEA9P43362 315 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 PDE6CP51160 858 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 CACNA2D1P54289 1103 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 PAK1Q13153 545 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 UBXN2BQ14CS0 331 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 CBWD6Q4V339 395 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 WDR44Q5JSH3 913 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 CBWD3Q5JTY5 395 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 CBWD5Q5RIA9 395 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 C1orf228Q6PIY5 440 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 CLEC17AQ6ZS10 378 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 PAQR9Q6ZVX9 377 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 TTC39CQ8N584 583 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 USP13Q92995 863 aaPredicted RBP15.69■□□□□ 0.1
CCDC38-205ENST00000546947 LRRC3BQ96PB8 259 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 NT5C1AQ9BXI3 368 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 FAM124BQ9H5Z6 455 aaPredicted RBP15.69■□□□□ 0.1
CCDC38-205ENST00000546947 TMEM30AQ9NV96 361 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 TRPM5Q9NZQ8 1165 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 HMGXB4Q9UGU5 601 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 CTNND2Q9UQB3 1225 aa15.69■□□□□ 0.1
CCDC38-205ENST00000546947 FAM170BA6NMN3 283 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 NCAM2O15394 837 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 LRRN2O75325 713 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 CILPO75339 1184 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 AP1G2O75843 785 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 USP17L7P0C7H9 530 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 USP46P62068 366 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 CCDC40Q4G0X9 1142 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 FUKQ8N0W3 1084 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 OVCA2Q8WZ82 227 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 SLC35C1Q96A29 364 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 SLITRK1Q96PX8 696 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 SMG9Q9H0W8 520 aaKnown RBP15.68■□□□□ 0.1
CCDC38-205ENST00000546947 C8orf33Q9H7E9 229 aaPredicted RBP15.68■□□□□ 0.1
CCDC38-205ENST00000546947 CSNK1G1Q9HCP0 422 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 TRPC7Q9HCX4 862 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 DMAP1Q9NPF5 467 aaPredicted RBP15.68■□□□□ 0.1
CCDC38-205ENST00000546947 COMMD8Q9NX08 183 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 PIAS3Q9Y6X2 628 aa15.68■□□□□ 0.1
CCDC38-205ENST00000546947 SHISA7A6NL88 538 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 H0Y858 1186 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 PMM2O15305 246 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 CCDC130P13994 396 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 TCF3P15923 654 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 CD58P19256 250 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 CD72P21854 359 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 TARSP26639 723 aaKnown RBP15.67■□□□□ 0.1
CCDC38-205ENST00000546947 ORC1Q13415 861 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 CAMK4Q16566 473 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 PDZD8Q8NEN9 1154 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 SLC2A14Q8TDB8 520 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 FAM3CQ92520 227 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 TWNKQ96RR1 684 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 KCNK16Q96T55 309 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 HNRNPABQ99729 332 aaKnown RBP15.67■□□□□ 0.1
CCDC38-205ENST00000546947 KRT82Q9NSB4 513 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 GCNT4Q9P109 453 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 CCL26Q9Y258 94 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 MTF2Q9Y483 593 aaPredicted RBP15.67■□□□□ 0.1
CCDC38-205ENST00000546947 MYO16Q9Y6X6 1858 aa15.67■□□□□ 0.1
CCDC38-205ENST00000546947 C2orf78A6NCI8 922 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 ZNF840PA6NDX5 716 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 TNFRSF10BO14763 440 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 FGFR1OPO95684 399 aaKnown RBP15.66■□□□□ 0.1
CCDC38-205ENST00000546947 GNA14O95837 355 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 CKMP06732 381 aa15.66■□□□□ 0.1
CCDC38-205ENST00000546947 HDCP19113 662 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms