RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 HESX1Q9UBX0 185 aa17.82■□□□□ 0.44
LTBR-215ENST00000546296 MOSPD3O75425 235 aa17.81■□□□□ 0.44
LTBR-215ENST00000546296 GOLGA7BQ2TAP0 167 aa17.81■□□□□ 0.44
LTBR-215ENST00000546296 KLHDC7AQ5VTJ3 777 aa17.81■□□□□ 0.44
LTBR-215ENST00000546296 LRSAM1Q6UWE0 723 aa17.81■□□□□ 0.44
LTBR-215ENST00000546296 GAREM2Q75VX8 874 aa17.81■□□□□ 0.44
LTBR-215ENST00000546296 TRMT2BQ96GJ1 504 aaKnown RBP17.81■□□□□ 0.44
LTBR-215ENST00000546296 MYRFLQ96LU7 910 aa17.81■□□□□ 0.44
LTBR-215ENST00000546296 DUSP16Q9BY84 665 aa17.81■□□□□ 0.44
LTBR-215ENST00000546296 GPR88Q9GZN0 384 aa17.81■□□□□ 0.44
LTBR-215ENST00000546296 IL21Q9HBE4 155 aa17.81■□□□□ 0.44
LTBR-215ENST00000546296 CSNK1G1Q9HCP0 422 aa17.81■□□□□ 0.44
LTBR-215ENST00000546296 C2orf16Q68DN1 1984 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 NRG2O14511 850 aaPredicted RBP17.8■□□□□ 0.44
LTBR-215ENST00000546296 BEST1O76090 585 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 RTN3O95197 1032 aaPredicted RBP17.8■□□□□ 0.44
LTBR-215ENST00000546296 SERPINC1P01008 464 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 F11P03951 625 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 NPR3P17342 541 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 YWHAQP27348 245 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 CYP4F8P98187 520 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 RAPGEF1Q13905 1077 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 SYCP1Q15431 976 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 GPR158Q5T848 1215 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 CLEC20AQ6ZU45 233 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 ANKRD52Q8NB46 1076 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 ST13P5Q8NFI4 369 aaPredicted RBP17.8■□□□□ 0.44
LTBR-215ENST00000546296 MRPS31Q92665 395 aaKnown RBP17.8■□□□□ 0.44
LTBR-215ENST00000546296 CNTN6Q9UQ52 1028 aa17.8■□□□□ 0.44
LTBR-215ENST00000546296 TNFRSF10AO00220 468 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 CALCAP01258 141 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 ASGR2P07307 311 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 BRD2P25440 801 aaKnown RBP17.79■□□□□ 0.44
LTBR-215ENST00000546296 KLK7P49862 253 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 ZNF132P52740 706 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 USP46P62068 366 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 MTSS1LQ765P7 747 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 APTXQ7Z2E3 356 aaKnown RBP17.79■□□□□ 0.44
LTBR-215ENST00000546296 ZMIZ2Q8NF64 920 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 SCAMP5Q8TAC9 235 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 TFAP2BQ92481 460 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 ZSWIM3Q96MP5 696 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 SLITRK1Q96PX8 696 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 KCNK12Q9HB15 430 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 PLCB1Q9NQ66 1216 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 FAM207AQ9NSI2 230 aaPredicted RBP17.79■□□□□ 0.44
LTBR-215ENST00000546296 TRPM5Q9NZQ8 1165 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 IGSF9Q9P2J2 1179 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 AJAP1Q9UKB5 411 aaPredicted RBP17.79■□□□□ 0.44
LTBR-215ENST00000546296 TSPAN16Q9UKR8 245 aa17.79■□□□□ 0.44
LTBR-215ENST00000546296 O00370 1275 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 FOXN3O00409 490 aaPredicted RBP17.78■□□□□ 0.44
LTBR-215ENST00000546296 TNFRSF10BO14763 440 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 MED7O43513 233 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 ABL1P00519 1130 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 UCHL3P15374 230 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 RFX1P22670 979 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 SLC5A3P53794 718 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 TAF10Q12962 218 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 DRAP1Q14919 205 aaPredicted RBP17.78■□□□□ 0.44
LTBR-215ENST00000546296 STILQ15468 1287 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 CNGA2Q16280 664 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 FAM78AQ5JUQ0 283 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 STXBP5Q5T5C0 1151 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 DPY19L2P1Q6NXN4 242 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 PARM1Q6UWI2 310 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 LCLAT1Q6UWP7 414 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 NEK11Q8NG66 645 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 UBA3Q8TBC4 463 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 ZSCAN18Q8TBC5 510 aaPredicted RBP17.78■□□□□ 0.44
LTBR-215ENST00000546296 SHC3Q92529 594 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 FBXO32Q969P5 355 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 NXPE3Q969Y0 559 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 TTLL2Q9BWV7 592 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 FBXO44Q9H4M3 255 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 TASP1Q9H6P5 420 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 TRPC7Q9HCX4 862 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 COMMD8Q9NX08 183 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 MUTYHQ9UIF7 546 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 FHOD1Q9Y613 1164 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 BDP1A6H8Y1 2624 aa17.78■□□□□ 0.44
LTBR-215ENST00000546296 DLL1O00548 723 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 CYP26A1O43174 497 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 THAP12O43422 761 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 DDX6P26196 483 aaKnown RBP eCLIP17.77■□□□□ 0.44
LTBR-215ENST00000546296 GNA15P30679 374 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 PPP3CCP48454 512 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 BCAT1P54687 386 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 HTR4Q13639 388 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 TXNDC8Q6A555 127 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 TMEM150AQ86TG1 271 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 TTC30AQ86WT1 665 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 GPIHBP1Q8IV16 184 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 MAB21L3Q8N8X9 362 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 RSAD2Q8WXG1 361 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 SMARCD2Q92925 531 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 STK33Q9BYT3 514 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 UBXN6Q9BZV1 441 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 PNPLA8Q9NP80 782 aa17.77■□□□□ 0.44
LTBR-215ENST00000546296 RTN4Q9NQC3 1192 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms