RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TMEM191BP0C7N4 346 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 IDEP14735 1019 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 PFKLP17858 780 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 STAT6P42226 847 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 NOP14P78316 857 aaKnown RBP13.43□□□□□ -0.26
COPS7A-221ENST00000546229 SLC7A9P82251 487 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 WDR49Q8IV35 697 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 PHTF2Q8N3S3 785 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 KIAA1958Q8N8K9 716 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 MYCBPAPQ8TBZ2 947 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 HPDLQ96IR7 371 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 MRPL45Q9BRJ2 306 aaKnown RBP13.43□□□□□ -0.26
COPS7A-221ENST00000546229 LSM14BQ9BX40 385 aaKnown RBP13.43□□□□□ -0.26
COPS7A-221ENST00000546229 TRIM9Q9C026 710 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 RNF38Q9H0F5 515 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 XYLT2Q9H1B5 865 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 TNMDQ9H2S6 317 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 HSPBP1Q9NZL4 362 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 LNP1A1A4G5 178 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 ZNF840PA6NDX5 716 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 LEFTY2O00292 366 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 EIF3DO15371 548 aaKnown RBP eCLIP13.42□□□□□ -0.26
COPS7A-221ENST00000546229 TACC1O75410 805 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 KRT19P08727 400 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 CCDC192P0DO97 292 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 PDCP20941 246 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 BCKDHBP21953 392 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 BDNFP23560 247 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 IFNAR2P48551 515 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 AMPD2Q01433 879 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 CEBPZQ03701 1054 aaKnown RBP13.42□□□□□ -0.26
COPS7A-221ENST00000546229 ST3GAL2Q16842 350 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 PMS2CLQ68D20 193 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 CC2D1AQ6P1N0 951 aaPredicted RBP13.42□□□□□ -0.26
COPS7A-221ENST00000546229 C4orf50Q6ZRC1 276 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 DENND5BQ6ZUT9 1274 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 TRAPPC11Q7Z392 1133 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 C12orf40Q86WS4 652 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 SCN4BQ8IWT1 228 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 SYCP3Q8IZU3 236 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 LINC00301Q8NCQ3 95 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 OLIG1Q8TAK6 271 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 PLEKHO2Q8TD55 490 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 DDX1Q92499 740 aaKnown RBP13.42□□□□□ -0.26
COPS7A-221ENST00000546229 ACDQ96AP0 544 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 ANKRD36BP1Q96IX9 119 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 C8orf48Q96LL4 319 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 PANK2Q9BZ23 570 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 DPEP3Q9H4B8 488 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 VPS45Q9NRW7 570 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 AGPAT3Q9NRZ7 376 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 MYOFQ9NZM1 2061 aa13.42□□□□□ -0.26
COPS7A-221ENST00000546229 DMXL2Q8TDJ6 3036 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 F8VP50 259 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 STAU1O95793 577 aaKnown RBP13.41□□□□□ -0.26
COPS7A-221ENST00000546229 CST3P01034 146 aaPredicted RBP13.41□□□□□ -0.26
COPS7A-221ENST00000546229 HDCP19113 662 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 TXLNAP40222 546 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 KCNB1Q14721 858 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 TMEM92Q6UXU6 159 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 C12orf50Q8NA57 414 aaPredicted RBP13.41□□□□□ -0.26
COPS7A-221ENST00000546229 MDGA1Q8NFP4 955 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 ZNF507Q8TCN5 953 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 ZNF516Q92618 1163 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 CNOT6LQ96LI5 555 aaKnown RBP13.41□□□□□ -0.26
COPS7A-221ENST00000546229 CGRRF1Q99675 332 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 TMEM121BQ9BXQ6 578 aaPredicted RBP13.41□□□□□ -0.26
COPS7A-221ENST00000546229 ZNF518BQ9C0D4 1074 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 MAGEC2Q9UBF1 373 aaPredicted RBP13.41□□□□□ -0.26
COPS7A-221ENST00000546229 MMP17Q9ULZ9 603 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 THADAQ6YHU6 1953 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 PCDH15Q96QU1 1955 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 LAMA5O15230 3695 aa13.41□□□□□ -0.26
COPS7A-221ENST00000546229 ZNF233A6NK53 670 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 KCNK5O95279 499 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 NFATC1O95644 943 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 KIR2DL1P43626 348 aaPredicted RBP13.4□□□□□ -0.26
COPS7A-221ENST00000546229 CYP24A1Q07973 514 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 MYO1EQ12965 1108 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 PSMD6Q15008 389 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 SNRNP35Q16560 246 aaKnown RBP13.4□□□□□ -0.26
COPS7A-221ENST00000546229 DUOXA2Q1HG44 320 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 BMT2Q1RMZ1 405 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 MDH1BQ5I0G3 518 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 IL31Q6EBC2 164 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 SHC4Q6S5L8 630 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 PAQR9Q6ZVX9 377 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 FILIP1Q7Z7B0 1213 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 CCDC65Q8IXS2 484 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 PDILTQ8N807 584 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 FSIP1Q8NA03 581 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 SCFD1Q8WVM8 642 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 INTS4Q96HW7 963 aaKnown RBP13.4□□□□□ -0.26
COPS7A-221ENST00000546229 EDEM2Q9BV94 578 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 TPSD1Q9BZJ3 242 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 IL37Q9NZH6 218 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 ANGPTL2Q9UKU9 493 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 HCN2Q9UL51 889 aa13.4□□□□□ -0.26
COPS7A-221ENST00000546229 UBE4BO95155 1302 aa13.39□□□□□ -0.27
COPS7A-221ENST00000546229 A0A0A0MRY4 1105 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms