RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 SERPINB6P35237 376 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 PTGER2P43116 358 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 IRX1P78414 480 aaPredicted RBP10.23□□□□□ -0.77
TRAF1-203ENST00000546084 LMNB2Q03252 620 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 PTK7Q13308 1070 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 TLDC1Q6P9B6 456 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 ARID3BQ8IVW6 561 aaPredicted RBP10.23□□□□□ -0.77
TRAF1-203ENST00000546084 AGBL3Q8NEM8 1001 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 BORCS6Q96GS4 357 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 FAXDC2Q96IV6 333 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 FIZ1Q96SL8 496 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 OSMRQ99650 979 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 SNX25Q9H3E2 840 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 SETD4Q9NVD3 440 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 DMAC2Q9NW81 257 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 ZC3H7BQ9UGR2 993 aaKnown RBP10.23□□□□□ -0.77
TRAF1-203ENST00000546084 PIN4Q9Y237 131 aaKnown RBP10.23□□□□□ -0.77
TRAF1-203ENST00000546084 ARAP2Q8WZ64 1704 aa10.23□□□□□ -0.77
TRAF1-203ENST00000546084 KCNK1O00180 336 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 DGKIO75912 1065 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 UNC5CO95185 931 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 PYGBP11216 843 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 INSRRP14616 1297 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 BGNP21810 368 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 ELK3P41970 407 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 ATXN1P54253 815 aaKnown RBP10.22□□□□□ -0.77
TRAF1-203ENST00000546084 FOXD4Q12950 439 aaPredicted RBP10.22□□□□□ -0.77
TRAF1-203ENST00000546084 VGLL4Q14135 290 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 SEPT6Q14141 434 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 RAB6CQ53S08 254 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 DCAF6Q58WW2 860 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 ZC3H12AQ5D1E8 599 aaKnown RBP10.22□□□□□ -0.77
TRAF1-203ENST00000546084 C6orf163Q5TEZ5 329 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 MFSD5Q6N075 450 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 C16orf46Q6P387 395 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 MAP7D3Q8IWC1 876 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 BBOF1Q8ND07 529 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 MORC4Q8TE76 937 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 RXFP2Q8WXD0 754 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 ITFG2Q969R8 447 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 LENG1Q96BZ8 264 aaPredicted RBP10.22□□□□□ -0.77
TRAF1-203ENST00000546084 RAB6CQ9H0N0 254 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 LRRC4Q9HBW1 653 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 HMGXB4Q9UGU5 601 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 USH1CQ9Y6N9 552 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 MT-CO1P00395 513 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 STAG3L1P0CL83 205 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 STAT4Q14765 748 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 ANKRD22Q5VYY1 191 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 PID1Q7Z2X4 250 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 UNC45BQ8IWX7 931 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 KIAA0319LQ8IZA0 1049 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 PGLYRP2Q96PD5 576 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 GOLGA2P5Q9HBQ8 144 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 NENFQ9UMX5 172 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 AFG3L2Q9Y4W6 797 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 MROH7Q68CQ1 1323 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 E5RJQ4 531 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 SLC26A4O43511 780 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 ENTPD5O75356 428 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 ARFIP2P53365 341 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 GDF10P55107 478 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 MTFR1Q15390 333 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 GOLGA7BQ2TAP0 167 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 C1orf220Q5T0J3 134 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 ARMC3Q5W041 872 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 DENND5BQ6ZUT9 1274 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 RCOR2Q8IZ40 523 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 POU5F2Q8N7G0 328 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 TCP10LQ8TDR4 215 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 PPP4R1Q8TF05 950 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 L3MBTL3Q96JM7 780 aaPredicted RBP10.22□□□□□ -0.77
TRAF1-203ENST00000546084 FAM81BQ96LP2 452 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 SH3GL3Q99963 347 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 IFT122Q9HBG6 1241 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 KIAA1586Q9HCI6 787 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 HEY2Q9UBP5 337 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 MYO7AQ13402 2215 aa10.22□□□□□ -0.77
TRAF1-203ENST00000546084 DCTN3O75935 186 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 MIPP30301 263 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 FOXN2P32314 431 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 NDST1P52848 882 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 NFIL3Q16649 462 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 ZACNQ401N2 412 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 TAF1BQ53T94 588 aaPredicted RBP10.21□□□□□ -0.77
TRAF1-203ENST00000546084 SPDYE1Q8NFV5 336 aaPredicted RBP10.21□□□□□ -0.77
TRAF1-203ENST00000546084 GRAMD1AQ96CP6 724 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 GPRASP2Q96D09 838 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 PAFAH2Q99487 392 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 TSC22D3Q99576 134 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 MAGEB5Q9BZ81 275 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 LRRC19Q9H756 370 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 FBXO6Q9NRD1 293 aaPredicted RBP10.21□□□□□ -0.77
TRAF1-203ENST00000546084 KLHL8Q9P2G9 620 aaPredicted RBP10.21□□□□□ -0.77
TRAF1-203ENST00000546084 LACTBL1A8MY62 500 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 OGTO15294 1046 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 CETPP11597 493 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 TPH1P17752 444 aa10.21□□□□□ -0.77
TRAF1-203ENST00000546084 TCN1P20061 433 aaPredicted RBP10.21□□□□□ -0.77
TRAF1-203ENST00000546084 TAC1P20366 129 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms