RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 CDH5P33151 784 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-225ENST00000545920 PEX3P56589 373 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 WDR4P57081 412 aaKnown RBP6.79□□□□□ -1.32
SNHG1-225ENST00000545920 NOMO3P69849 1222 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 TCP10Q12799 353 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 GRIK3Q13003 919 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 MAMLD1Q13495 774 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 CUL2Q13617 745 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 TMED2Q15363 201 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 TAF11Q15544 211 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 GSTA3Q16772 222 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 XKR9Q5GH70 373 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 TFDP3Q5H9I0 405 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 CIAPIN1Q6FI81 312 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 IRGCQ6NXR0 463 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 AADACL2Q6P093 401 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 SESTD1Q86VW0 696 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 TREML1Q86YW5 311 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 CBWD2Q8IUF1 395 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 PPIL6Q8IXY8 311 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 EXOC8Q8IYI6 725 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 THNSL1Q8IYQ7 743 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 RBBP8NLQ8NC74 664 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-225ENST00000545920 MGARPQ8TDB4 240 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 ASAP3Q8TDY4 903 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 C10orf82Q8WW14 230 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 POMGNT1Q8WZA1 660 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 SAAL1Q96ER3 474 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 DHRS4Q9BTZ2 278 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 TRIM55Q9BYV6 548 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 MIS12Q9H081 205 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 FAM96AQ9H5X1 160 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 LRRC4CQ9HCJ2 640 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 PDLIM7Q9NR12 457 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 SPATS2LQ9NUQ6 558 aaKnown RBP6.79□□□□□ -1.32
SNHG1-225ENST00000545920 MKS1Q9NXB0 559 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 WDR35Q9P2L0 1181 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 VTI1BQ9UEU0 232 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 USP21Q9UK80 565 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 SORCS3Q9UPU3 1222 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 PCDHA10Q9Y5I2 948 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 GPC6Q9Y625 555 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-225ENST00000545920 AK5Q9Y6K8 562 aa6.79□□□□□ -1.32
SNHG1-225ENST00000545920 RBBP6Q7Z6E9 1792 aaKnown RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 LRRD1A4D1F6 860 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 TMEM191CA6NGB0 347 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 SOBPA7XYQ1 873 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 F8W8V4 182 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 MEN1O00255 615 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 EIF1AYO14602 144 aaKnown RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 HNRNPDLO14979 420 aaKnown RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 AHCYL1O43865 530 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ZIC2O95409 532 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 HLA-DRAP01903 254 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 C4BPAP04003 597 aaKnown RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 FESP07332 822 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 PSAPP07602 524 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 TMEM191BP0C7N4 346 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 TPBGLP0DKB5 382 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 CA4P22748 312 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 MMP8P22894 467 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 EIF4BP23588 611 aaKnown RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 CCND2P30279 289 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 STIP1P31948 543 aaKnown RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 FOXN2P32314 431 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 CAP2P40123 477 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 VHLP40337 213 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ZNF132P52740 706 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 OAZ1P54368 228 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 RPL26P61254 145 aaKnown RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 RELBQ01201 579 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 MPP2Q14168 576 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 LRRC14Q15048 493 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 OASLQ15646 514 aaKnown RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 TAZQ16635 292 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 HIF1AQ16665 826 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 HADHQ16836 314 aaKnown RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 P3H1Q32P28 736 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ACCSLQ4AC99 568 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 XKR3Q5GH77 459 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 TMEM63BQ5T3F8 832 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 FAM102BQ5T8I3 360 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 RNASEH2BQ5TBB1 312 aaKnown RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 LGSNQ5TDP6 509 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 IER5Q5VY09 327 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 CDCA2Q69YH5 1023 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 CGB2Q6NT52 195 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 MIS18BP1Q6P0N0 1132 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 BBS12Q6ZW61 710 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 KIAA0825Q8IV33 1275 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 KSR1Q8IVT5 923 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ARHGAP18Q8N392 663 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 TMEM35BQ8NCS4 154 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 PPFIBP2Q8ND30 876 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 GDAP1Q8TB36 358 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 SLC35B2Q8TB61 432 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 SYTL5Q8TDW5 730 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ZFAND2BQ8WV99 257 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 CLEC4DQ8WXI8 215 aa6.78□□□□□ -1.32
SNHG1-225ENST00000545920 ZNF75CPQ92670 426 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms