RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 THAP7Q9BT49 309 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-224ENST00000545688 DPH1Q9BZG8 443 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 MS4A7Q9GZW8 240 aaPredicted RBP5.88□□□□□ -1.47
SNHG1-224ENST00000545688 ATP6V0A4Q9HBG4 840 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 SNX14Q9Y5W7 946 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 CACNA1IQ9P0X4 2223 aa5.88□□□□□ -1.47
SNHG1-224ENST00000545688 PPP6CO00743 305 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 RFPL1O75677 317 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 TUSC2O75896 110 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 EPHB1P54762 984 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 SLC13A2Q13183 592 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 CYP1B1Q16678 543 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 ANO6Q4KMQ2 910 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 PLA1AQ53H76 456 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 SLC18B1Q6NT16 456 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 KIRREL2Q6UWL6 708 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 NPNTQ6UXI9 565 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 DPY19L3Q6ZPD9 716 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 CAND1Q86VP6 1230 aaKnown RBP5.87□□□□□ -1.47
SNHG1-224ENST00000545688 MPP5Q8N3R9 675 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 BPIFB1Q8TDL5 484 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 TMEM171Q8WVE6 324 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 DAZAP1Q96EP5 407 aaKnown RBP5.87□□□□□ -1.47
SNHG1-224ENST00000545688 B3GNT5Q9BYG0 378 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 SMURF2Q9HAU4 748 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 NRIP3Q9NQ35 241 aa5.87□□□□□ -1.47
SNHG1-224ENST00000545688 ADAMTS3O15072 1205 aa5.86□□□□□ -1.47
SNHG1-224ENST00000545688 PHGDHO43175 533 aaKnown RBP5.86□□□□□ -1.47
SNHG1-224ENST00000545688 TUBB4AP04350 444 aa5.86□□□□□ -1.47
SNHG1-224ENST00000545688 DLDP09622 509 aaKnown RBP5.86□□□□□ -1.47
SNHG1-224ENST00000545688 PRKAG1P54619 331 aa5.86□□□□□ -1.47
SNHG1-224ENST00000545688 TBC1D25Q3MII6 688 aa5.86□□□□□ -1.47
SNHG1-224ENST00000545688 L1TD1Q5T7N2 865 aaKnown RBP5.86□□□□□ -1.47
SNHG1-224ENST00000545688 SLC9A4Q6AI14 798 aa5.86□□□□□ -1.47
SNHG1-224ENST00000545688 FCRL6Q6DN72 434 aa5.86□□□□□ -1.47
SNHG1-224ENST00000545688 RAVER1Q8IY67 606 aaKnown RBP5.86□□□□□ -1.47
SNHG1-224ENST00000545688 IZUMO1Q8IYV9 350 aa5.86□□□□□ -1.47
SNHG1-224ENST00000545688 RITA1Q96K30 269 aa5.86□□□□□ -1.47
SNHG1-224ENST00000545688 ASB2Q96Q27 587 aa5.86□□□□□ -1.47
SNHG1-224ENST00000545688 DPCDQ9BVM2 203 aaPredicted RBP5.86□□□□□ -1.47
SNHG1-224ENST00000545688 TRMT13Q9NUP7 481 aaKnown RBP5.86□□□□□ -1.47
SNHG1-224ENST00000545688 BTBD3Q9Y2F9 522 aa5.86□□□□□ -1.47
SNHG1-224ENST00000545688 TBC1D4O60343 1298 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 EXOC3O60645 756 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 EN2P19622 333 aaPredicted RBP5.85□□□□□ -1.47
SNHG1-224ENST00000545688 FPR3P25089 353 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 E2F1Q01094 437 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 ETFDHQ16134 617 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 MORN5Q5VZ52 161 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 C11orf87Q6NUJ2 197 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 SWSAP1Q6NVH7 229 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 SLC2A7Q6PXP3 512 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 CATSPERGQ6ZRH7 1159 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 TERB1Q8NA31 727 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 IL31RAQ8NI17 732 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 MAML1Q92585 1016 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 RPL36ALQ969Q0 106 aaKnown RBP5.85□□□□□ -1.47
SNHG1-224ENST00000545688 PPP2R3CQ969Q6 453 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 RUNDC1Q96C34 613 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 C5orf34Q96MH7 638 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 PRR25Q96S07 402 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 C17orf80Q9BSJ5 609 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 TBC1D30Q9Y2I9 924 aa5.85□□□□□ -1.47
SNHG1-224ENST00000545688 THRAP3Q9Y2W1 955 aaKnown RBP5.85□□□□□ -1.47
SNHG1-224ENST00000545688 H7C1Q1 480 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 AP4M1O00189 453 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 CTNND1O60716 968 aaKnown RBP5.84□□□□□ -1.47
SNHG1-224ENST00000545688 PRKCBP05771 671 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 SFPQP23246 707 aaKnown RBP eCLIP5.84□□□□□ -1.47
SNHG1-224ENST00000545688 SLC7A1P30825 629 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 RAB32Q13637 225 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 PTCHD3Q3KNS1 767 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 RNASE12Q5GAN4 147 aaKnown RBP5.84□□□□□ -1.47
SNHG1-224ENST00000545688 DCAF12L1Q5VU92 463 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 MAEAQ7L5Y9 396 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 C8orf58Q8NAV2 365 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 CIPCQ9C0C6 399 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 BHMT2Q9H2M3 363 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 GBA2Q9HCG7 927 aaPredicted RBP5.84□□□□□ -1.47
SNHG1-224ENST00000545688 PDGFCQ9NRA1 345 aa5.84□□□□□ -1.47
SNHG1-224ENST00000545688 NOB1Q9ULX3 412 aaKnown RBP5.84□□□□□ -1.47
SNHG1-224ENST00000545688 TBX3O15119 743 aa5.83□□□□□ -1.48
SNHG1-224ENST00000545688 ARHGAP25P42331 645 aa5.83□□□□□ -1.48
SNHG1-224ENST00000545688 RENBPP51606 427 aa5.83□□□□□ -1.48
SNHG1-224ENST00000545688 MLC1Q15049 377 aa5.83□□□□□ -1.48
SNHG1-224ENST00000545688 MTHFD1LQ6UB35 978 aa5.83□□□□□ -1.48
SNHG1-224ENST00000545688 ZDHHC24Q6UX98 284 aa5.83□□□□□ -1.48
SNHG1-224ENST00000545688 SNX18Q96RF0 628 aa5.83□□□□□ -1.48
SNHG1-224ENST00000545688 C22orf23Q9BZE7 217 aa5.83□□□□□ -1.48
SNHG1-224ENST00000545688 ZSCAN32Q9NX65 697 aa5.83□□□□□ -1.48
SNHG1-224ENST00000545688 USP19O94966 1318 aa5.82□□□□□ -1.48
SNHG1-224ENST00000545688 SMIM35A0A1B0GVV1 85 aa5.82□□□□□ -1.48
SNHG1-224ENST00000545688 POC1B-GALNT4F8VUJ3 575 aa5.82□□□□□ -1.48
SNHG1-224ENST00000545688 PRPF3O43395 683 aaKnown RBP5.82□□□□□ -1.48
SNHG1-224ENST00000545688 ALDH5A1P51649 535 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-224ENST00000545688 PSG6Q00889 435 aa5.82□□□□□ -1.48
SNHG1-224ENST00000545688 ODR4Q5SWX8 454 aa5.82□□□□□ -1.48
SNHG1-224ENST00000545688 CERCAMQ5T4B2 595 aa5.82□□□□□ -1.48
SNHG1-224ENST00000545688 CXorf57Q6NSI4 855 aaKnown RBP5.82□□□□□ -1.48
SNHG1-224ENST00000545688 GALNT16Q8N428 558 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms