RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 FAM71AQ8IYT1 594 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 B3GALNT2Q8NCR0 500 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 CMASQ8NFW8 434 aaPredicted RBP12.58□□□□□ -0.4
LTBR-214ENST00000545445 PJA1Q8NG27 643 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 KAT5Q92993 513 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 SYT15Q9BQS2 421 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 CLSTN3Q9BQT9 956 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 TTYH3Q9C0H2 523 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 ZCWPW1Q9H0M4 648 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 CDY1Q9Y6F8 540 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 C2orf16Q68DN1 1984 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 F8VZ95 297 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 EPHB6O15197 1021 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 TEX28O15482 410 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 KRT5P13647 590 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 CPB1P15086 417 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 CDC25BP30305 580 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 OR1D2P34982 312 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 ZNF132P52740 706 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 RAD23BP54727 409 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 JAM2P57087 298 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 STILQ15468 1287 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 FAM171BQ6P995 826 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 ELMSAN1Q6PJG2 1045 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 C4orf50Q6ZRC1 276 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 RTL10Q7L3V2 364 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 GET4Q7L5D6 327 aaPredicted RBP12.57□□□□□ -0.4
LTBR-214ENST00000545445 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.57□□□□□ -0.4
LTBR-214ENST00000545445 RBBP8NLQ8NC74 664 aaPredicted RBP12.57□□□□□ -0.4
LTBR-214ENST00000545445 OR10T2Q8NGX3 314 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 ZNF461Q8TAF7 563 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 MYCBPAPQ8TBZ2 947 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 WHAMMQ8TF30 809 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 SMG7Q92540 1137 aaKnown RBP12.57□□□□□ -0.4
LTBR-214ENST00000545445 ZNF707Q96C28 371 aaPredicted RBP12.57□□□□□ -0.4
LTBR-214ENST00000545445 FUBP3Q96I24 572 aaKnown RBP eCLIP12.57□□□□□ -0.4
LTBR-214ENST00000545445 NLRC4Q9NPP4 1024 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 HSFX1Q9UBD0 423 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 AFF4Q9UHB7 1163 aaKnown RBP12.57□□□□□ -0.4
LTBR-214ENST00000545445 CDV3Q9UKY7 258 aaKnown RBP12.57□□□□□ -0.4
LTBR-214ENST00000545445 CAPN11Q9UMQ6 739 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 LUC7L2Q9Y383 392 aaKnown RBP12.57□□□□□ -0.4
LTBR-214ENST00000545445 CACNA1GO43497 2377 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 COL4A3Q01955 1670 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 ATP8B3O60423 1300 aa12.57□□□□□ -0.4
LTBR-214ENST00000545445 CHD8Q9HCK8 2581 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 DCDC2BA2VCK2 349 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 FOXN3O00409 490 aaPredicted RBP12.56□□□□□ -0.4
LTBR-214ENST00000545445 ABLIM3O94929 683 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 ADCY5O95622 1261 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 VDRP11473 427 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 ACAT1P24752 427 aaKnown RBP12.56□□□□□ -0.4
LTBR-214ENST00000545445 SOX5P35711 763 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 USP8P40818 1118 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 ZBED6P86452 979 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 ROR1Q01973 937 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 PTK2Q05397 1052 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 HTR4Q13639 388 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 ZNF394Q53GI3 561 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 ACOT1Q86TX2 421 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 SLC4A11Q8NBS3 891 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 SPPL2BQ8TCT7 592 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 HDAC7Q8WUI4 952 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 ANP32BQ92688 251 aaKnown RBP12.56□□□□□ -0.4
LTBR-214ENST00000545445 SYN2Q92777 582 aaPredicted RBP12.56□□□□□ -0.4
LTBR-214ENST00000545445 HEXIM2Q96MH2 286 aaKnown RBP12.56□□□□□ -0.4
LTBR-214ENST00000545445 TWNKQ96RR1 684 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 PKMYT1Q99640 499 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 GPR88Q9GZN0 384 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 ELOVL4Q9GZR5 314 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 ABCB6Q9NP58 842 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 SPATA6Q9NWH7 488 aaPredicted RBP12.56□□□□□ -0.4
LTBR-214ENST00000545445 GTF3C4Q9UKN8 822 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 SMG5Q9UPR3 1016 aaKnown RBP12.56□□□□□ -0.4
LTBR-214ENST00000545445 PCDHB5Q9Y5E4 795 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 NUMBLQ9Y6R0 609 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 MAP1BP46821 2468 aaKnown RBP12.56□□□□□ -0.4
LTBR-214ENST00000545445 CHD6Q8TD26 2715 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 VWA8A3KMH1 1905 aa12.56□□□□□ -0.4
LTBR-214ENST00000545445 USP24Q9UPU5 2620 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 WDR27A2RRH5 827 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 MYBPHLA2RUH7 354 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 GOLGA6L6A8MZA4 724 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 MED7O43513 233 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 GLUD1P00367 558 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 SPATA31D3P0C874 917 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 ATF2P15336 505 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 FERP16591 822 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 RPL17P18621 184 aaKnown RBP12.55□□□□□ -0.4
LTBR-214ENST00000545445 ELF1P32519 619 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 ARPP19P56211 112 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 LMNB2Q03252 620 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 MEA1Q16626 185 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 TSR1Q2NL82 804 aaKnown RBP12.55□□□□□ -0.4
LTBR-214ENST00000545445 CFAP221Q4G0U5 840 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 SLC39A12Q504Y0 691 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 SGO2Q562F6 1265 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 ARHGAP17Q68EM7 881 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 LILRA6Q6PI73 481 aa12.55□□□□□ -0.4
LTBR-214ENST00000545445 RSPO2Q6UXX9 243 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms