RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 SMOQ99835 787 aa13.74□□□□□ -0.21
CDCA3-210ENST00000545368 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.74□□□□□ -0.21
CDCA3-210ENST00000545368 LHX5Q9H2C1 402 aa13.74□□□□□ -0.21
CDCA3-210ENST00000545368 SFXN1Q9H9B4 322 aa13.74□□□□□ -0.21
CDCA3-210ENST00000545368 PNPLA8Q9NP80 782 aa13.74□□□□□ -0.21
CDCA3-210ENST00000545368 ZDHHC7Q9NXF8 308 aa13.74□□□□□ -0.21
CDCA3-210ENST00000545368 SSU72P8A0A1W2PR75 194 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 NRDCO43847 1150 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 XYLBO75191 536 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 BEST1O76090 585 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 CFHP08603 1231 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 HNRNPA1P09651 372 aaKnown RBP eCLIP13.73□□□□□ -0.21
CDCA3-210ENST00000545368 HOXA9P31269 272 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 GPD2P43304 727 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 PLA2G4AP47712 749 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 GPR15P49685 360 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 CACNA2D1P54289 1103 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 CDK17Q00537 523 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 CCDC173Q0VFZ6 552 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 KCNC3Q14003 757 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 TAF12Q16514 161 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 PKDCCQ504Y2 493 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 PPP1R2P3Q6NXS1 205 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 WDR59Q6PJI9 974 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 CYP26C1Q6V0L0 522 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 EP400NLQ6ZTU2 488 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 CCDC186Q7Z3E2 898 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 ITIH5Q86UX2 942 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 C1orf131Q8NDD1 294 aaKnown RBP13.73□□□□□ -0.21
CDCA3-210ENST00000545368 SPATA17Q96L03 361 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 CCDC42Q96M95 316 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 GUCD1Q96NT3 240 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 KCNK16Q96T55 309 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 UBXN6Q9BZV1 441 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 MTMR10Q9NXD2 777 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 EHD2Q9NZN4 543 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 ARHGAP20Q9P2F6 1191 aa13.73□□□□□ -0.21
CDCA3-210ENST00000545368 PLEKP08567 350 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-210ENST00000545368 CSH1P0DML2 217 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 CSH2P0DML3 217 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 CHRNB2P17787 502 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 ATF6P18850 670 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 CDH5P33151 784 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-210ENST00000545368 EIF4A3P38919 411 aaKnown RBP13.72□□□□□ -0.21
CDCA3-210ENST00000545368 ACADSBP45954 432 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 NSFP46459 744 aaKnown RBP13.72□□□□□ -0.21
CDCA3-210ENST00000545368 SLC5A3P53794 718 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 SNX16P57768 344 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 SDHAF4Q5VUM1 108 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 NAA35Q5VZE5 725 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 TMEM184AQ6ZMB5 413 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 PIGZQ86VD9 579 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 ZMIZ2Q8NF64 920 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 VN1R2Q8NFZ6 395 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 IPO4Q8TEX9 1081 aaKnown RBP13.72□□□□□ -0.21
CDCA3-210ENST00000545368 GIPC2Q8TF65 315 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 PDLIM2Q96JY6 352 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 HSFY1Q96LI6 401 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 BAG1Q99933 345 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-210ENST00000545368 SYT11Q9BT88 431 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 MIS12Q9H081 205 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 SYNCQ9H7C4 482 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 LRRC4Q9HBW1 653 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 ST7Q9NRC1 585 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 TMEM30AQ9NV96 361 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 CLDND1Q9NY35 253 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 ASB3Q9Y575 518 aa13.72□□□□□ -0.21
CDCA3-210ENST00000545368 SLC38A8A6NNN8 435 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 LINC01565O15544 149 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 AKR1B10O60218 316 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 RTN3O95197 1032 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-210ENST00000545368 GLP2RO95838 553 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 CYP1A1P04798 512 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-210ENST00000545368 RGS7P49802 495 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 NOMO3P69849 1222 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 RBM10P98175 930 aaKnown RBP13.71□□□□□ -0.21
CDCA3-210ENST00000545368 PDCLQ13371 301 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 ADAM15Q13444 863 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 CLEC16AQ2KHT3 1053 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 ANKRD54Q6NXT1 300 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 DENND5BQ6ZUT9 1274 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 TMTC1Q8IUR5 882 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 NUP93Q8N1F7 819 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 SIX6OS1Q8N1H7 587 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 CCDC112Q8NEF3 446 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 GPR152Q8TDT2 470 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 STK32AQ8WU08 396 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 SLC35F5Q8WV83 523 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 KCTD13Q8WZ19 329 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 PSMG2Q969U7 264 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 PABPC5Q96DU9 382 aaKnown RBP13.71□□□□□ -0.21
CDCA3-210ENST00000545368 ZNF512Q96ME7 567 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-210ENST00000545368 CHP1Q99653 195 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 FBXO44Q9H4M3 255 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 NHEJ1Q9H9Q4 299 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-210ENST00000545368 PIDD1Q9HB75 910 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 CYLDQ9NQC7 956 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 ADAMTS1Q9UHI8 967 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 MYO16Q9Y6X6 1858 aa13.71□□□□□ -0.21
CDCA3-210ENST00000545368 CCDC195A0A1B0GUA6 201 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms