RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 RPL6Q02878 288 aaKnown RBP10.1□□□□□ -0.79
CHD4-212ENST00000545083 ZNF33AQ06730 810 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 HNRNPDQ14103 355 aaKnown RBP10.1□□□□□ -0.79
CHD4-212ENST00000545083 KCNB1Q14721 858 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 DHCR24Q15392 516 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 NFE2Q16621 373 aaPredicted RBP10.1□□□□□ -0.79
CHD4-212ENST00000545083 KYAT1Q16773 422 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 LMBRD2Q68DH5 695 aaPredicted RBP10.1□□□□□ -0.79
CHD4-212ENST00000545083 SCARA3Q6AZY7 606 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 FILIP1Q7Z7B0 1213 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 MARCH9Q86YJ5 346 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 PGBD3Q8N328 593 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 GLIS3Q8NEA6 775 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 CEP76Q8TAP6 659 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 LEO1Q8WVC0 666 aaPredicted RBP10.1□□□□□ -0.79
CHD4-212ENST00000545083 KCNN1Q92952 543 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 PNMA5Q96PV4 448 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 TIPINQ9BVW5 301 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 SCUBE2Q9NQ36 999 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 DPP3Q9NY33 737 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 L1RE1Q9UN81 338 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 DERAQ9Y315 318 aa10.1□□□□□ -0.79
CHD4-212ENST00000545083 ANAPC1Q9H1A4 1944 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 MYMKA6NI61 221 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 EIF4E1BA6NMX2 242 aaKnown RBP10.09□□□□□ -0.79
CHD4-212ENST00000545083 KPNA7A9QM74 516 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 ANKRD63C9JTQ0 380 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 AP5Z1O43299 807 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 GABRG2P18507 467 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 ACOT2P49753 483 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 TOB1P50616 345 aaPredicted RBP10.09□□□□□ -0.79
CHD4-212ENST00000545083 SLC12A3P55017 1021 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 ATP2C1P98194 919 aaPredicted RBP10.09□□□□□ -0.79
CHD4-212ENST00000545083 KDSRQ06136 332 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 ANKRD1Q15327 319 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 ZRSR1Q15695 479 aaKnown RBP10.09□□□□□ -0.79
CHD4-212ENST00000545083 HSF5Q4G112 596 aaPredicted RBP10.09□□□□□ -0.79
CHD4-212ENST00000545083 ARSHQ5FYA8 562 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 INTS6LQ5JSJ4 861 aaKnown RBP10.09□□□□□ -0.79
CHD4-212ENST00000545083 EOGTQ5NDL2 527 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 KRT79Q5XKE5 535 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 RHBDF2Q6PJF5 856 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 OSTM1Q86WC4 334 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 NAXDQ8IW45 347 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 SCN4BQ8IWT1 228 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 ADGRG2Q8IZP9 1017 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 PHTF2Q8N3S3 785 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 PDCL2Q8N4E4 241 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 SYT2Q8N9I0 419 aaPredicted RBP10.09□□□□□ -0.79
CHD4-212ENST00000545083 SPATA18Q8TC71 538 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 PNKPQ96T60 521 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 PLIN2Q99541 437 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 MSTO1Q9BUK6 570 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 FOXP1Q9H334 677 aaPredicted RBP10.09□□□□□ -0.79
CHD4-212ENST00000545083 ASB7Q9H672 318 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 ABCB6Q9NP58 842 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 CD93Q9NPY3 652 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 CALCOCO1Q9P1Z2 691 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 GTF3C4Q9UKN8 822 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 HCN2Q9UL51 889 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 C2CD2Q9Y426 696 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 PCDHB6Q9Y5E3 794 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 STK24Q9Y6E0 443 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 TENM4Q6N022 2769 aa10.09□□□□□ -0.79
CHD4-212ENST00000545083 MYO18AQ92614 2054 aaKnown RBP10.09□□□□□ -0.79
CHD4-212ENST00000545083 A0A0A0MRY4 1105 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 IGHV1OR15-9A0A0B4J2B8 117 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 CBFA2T3O75081 653 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 C1QL1O75973 258 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 APODP05090 189 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 EIF2DP41214 584 aaKnown RBP10.08□□□□□ -0.8
CHD4-212ENST00000545083 TRAPPC10P48553 1259 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 WNT7BP56706 349 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 USP46P62068 366 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 RESTQ13127 1097 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 SLC14A1Q13336 389 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 BYSLQ13895 437 aaKnown RBP10.08□□□□□ -0.8
CHD4-212ENST00000545083 SV2CQ496J9 727 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 TOGARAM2Q6ZUX3 1019 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 MIB1Q86YT6 1006 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 FAM84AQ96KN4 292 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 HSPA12BQ96MM6 686 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 ACBD6Q9BR61 282 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 RAB34Q9BZG1 259 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 RNF38Q9H0F5 515 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 IKZF4Q9H2S9 585 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 ARHGEF4Q9NR80 690 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 DDX43Q9NXZ2 648 aaKnown RBP10.08□□□□□ -0.8
CHD4-212ENST00000545083 KCNG1Q9UIX4 513 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 PCDHB9Q9Y5E1 797 aa10.08□□□□□ -0.8
CHD4-212ENST00000545083 HELZP42694 1942 aaKnown RBP10.07□□□□□ -0.8
CHD4-212ENST00000545083 GOLGA4Q13439 2230 aaKnown RBP10.07□□□□□ -0.8
CHD4-212ENST00000545083 MYOFQ9NZM1 2061 aa10.07□□□□□ -0.8
CHD4-212ENST00000545083 MYH11P35749 1972 aa10.07□□□□□ -0.8
CHD4-212ENST00000545083 A0A1W2PQD8 194 aa10.07□□□□□ -0.8
CHD4-212ENST00000545083 A0A1W2PQF6 199 aa10.07□□□□□ -0.8
CHD4-212ENST00000545083 H0YCG3 227 aa10.07□□□□□ -0.8
CHD4-212ENST00000545083 K7ENM7 598 aa10.07□□□□□ -0.8
CHD4-212ENST00000545083 SYPP08247 313 aa10.07□□□□□ -0.8
CHD4-212ENST00000545083 PLA2G4BP0C869 781 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms