RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CCDC192P0DO97 292 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 CCDC130P13994 396 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 FMO5P49326 533 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 CACNA2D1P54289 1103 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 USP46P62068 366 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 ARHGAP29Q52LW3 1261 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 IER5LQ5T953 404 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 NUP93Q8N1F7 819 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 C12orf29Q8N999 325 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 SLC2A14Q8TDB8 520 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 BPIFB1Q8TDL5 484 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 CSGALNACT1Q8TDX6 532 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 RSPRY1Q96DX4 576 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 SLITRK1Q96PX8 696 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 KCNK16Q96T55 309 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 TTLL2Q9BWV7 592 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 KIF9Q9HAQ2 790 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 HEBP1Q9NRV9 189 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 FAM49BQ9NUQ9 324 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 SIT1Q9Y3P8 196 aa16.69■□□□□ 0.26
CCDC78-216ENST00000544996 KANSL1LA0AUZ9 987 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 TADA3O75528 432 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 USP17L7P0C7H9 530 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 YWHAQP27348 245 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 YWHAEP62258 255 aaKnown RBP16.68■□□□□ 0.26
CCDC78-216ENST00000544996 PLCB2Q00722 1185 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 ZNF852Q6ZMS4 543 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 TPRG1Q6ZUI0 275 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 PAQR9Q6ZVX9 377 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 TATDN2Q93075 761 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 CYFIP2Q96F07 1278 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 TWNKQ96RR1 684 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 NELL2Q99435 816 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 HNRNPABQ99729 332 aaKnown RBP16.68■□□□□ 0.26
CCDC78-216ENST00000544996 SMG9Q9H0W8 520 aaKnown RBP16.68■□□□□ 0.26
CCDC78-216ENST00000544996 CISHQ9NSE2 258 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 TDP1Q9NUW8 608 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 TMEM30AQ9NV96 361 aa16.68■□□□□ 0.26
CCDC78-216ENST00000544996 MRPS17Q9Y2R5 130 aaKnown RBP16.68■□□□□ 0.26
CCDC78-216ENST00000544996 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.68■□□□□ 0.26
CCDC78-216ENST00000544996 MAN2B1O00754 1011 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 PMM2O15305 246 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 P4HA2O15460 535 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 PI15O43692 258 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 CKMP06732 381 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 FAM200BP0CF97 657 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 PFKLP17858 780 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 HDCP19113 662 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 ADORA2BP29275 332 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 PTPN5P54829 565 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 MARSP56192 900 aaKnown RBP16.67■□□□□ 0.26
CCDC78-216ENST00000544996 IFRD2Q12894 506 aaPredicted RBP16.67■□□□□ 0.26
CCDC78-216ENST00000544996 TAF10Q12962 218 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 ZNF394Q53GI3 561 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 CC2D1AQ6P1N0 951 aaPredicted RBP16.67■□□□□ 0.26
CCDC78-216ENST00000544996 TRIM59Q8IWR1 403 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 PDZD8Q8NEN9 1154 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 WHAMMQ8TF30 809 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 USP13Q92995 863 aaPredicted RBP16.67■□□□□ 0.26
CCDC78-216ENST00000544996 HEXIM2Q96MH2 286 aaKnown RBP16.67■□□□□ 0.26
CCDC78-216ENST00000544996 LRRC3BQ96PB8 259 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 DDX23Q9BUQ8 820 aaKnown RBP16.67■□□□□ 0.26
CCDC78-216ENST00000544996 IRF2BPLQ9H1B7 796 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 COMMD8Q9NX08 183 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 DACH1Q9UI36 760 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 NCANO14594 1321 aa16.67■□□□□ 0.26
CCDC78-216ENST00000544996 ZNF840PA6NDX5 716 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 NCAM2O15394 837 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 GALR2O43603 387 aaPredicted RBP16.66■□□□□ 0.26
CCDC78-216ENST00000544996 ABL1P00519 1130 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 GLULP15104 373 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 TBXAS1P24557 533 aaPredicted RBP16.66■□□□□ 0.26
CCDC78-216ENST00000544996 MLLT6P55198 1093 aaPredicted RBP16.66■□□□□ 0.26
CCDC78-216ENST00000544996 MAP3K7CLP57077 242 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 CUL2Q13617 745 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 ZNF268Q14587 947 aaPredicted RBP16.66■□□□□ 0.26
CCDC78-216ENST00000544996 UBXN2BQ14CS0 331 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 TPD52L1Q16890 204 aaPredicted RBP16.66■□□□□ 0.26
CCDC78-216ENST00000544996 CREBRFQ8IUR6 639 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 PJA1Q8NG27 643 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 FBXO32Q969P5 355 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 FAM122AQ96E09 287 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 TMEM176AQ96HP8 235 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 NT5C1BQ96P26 610 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 CYP2S1Q96SQ9 504 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 ARID3AQ99856 593 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 OSBPL6Q9BZF3 934 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 FOXQ1Q9C009 403 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 CSNK1G1Q9HCP0 422 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 CCL26Q9Y258 94 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 PIAS3Q9Y6X2 628 aa16.66■□□□□ 0.26
CCDC78-216ENST00000544996 C2orf78A6NCI8 922 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 FAM170BA6NMN3 283 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 ARNTLO00327 626 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 AFPP02771 609 aaKnown RBP16.65■□□□□ 0.26
CCDC78-216ENST00000544996 KPNA1P52294 538 aaPredicted RBP16.65■□□□□ 0.26
CCDC78-216ENST00000544996 SLC5A3P53794 718 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 KCNH2Q12809 1159 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 LRMPQ12912 555 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 C1orf228Q6PIY5 440 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms