RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 TCHPQ9BT92 498 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 ADAM33Q9BZ11 813 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 MTMR12Q9C0I1 747 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 RNF186Q9NXI6 227 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 TJP2Q9UDY2 1190 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 A8MUI8 341 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 ACKR2O00590 384 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 SNX3O60493 162 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 KCNA4P22459 653 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 ZNF252P-AS1Q0IIN9 211 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 PTP4A2Q12974 167 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 ORC1Q13415 861 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
CHFR-223ENST00000544268 B4GALNT2Q8NHY0 566 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 C9orf72Q96LT7 481 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 EPAS1Q99814 870 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 NFKBIZQ9BYH8 718 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 C10orf88Q9H8K7 445 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 LMCD1Q9NZU5 365 aa15.75■□□□□ 0.11
CHFR-223ENST00000544268 DUSP11O75319 330 aaKnown RBP15.74■□□□□ 0.11
CHFR-223ENST00000544268 RNF8O76064 485 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 PROSCO94903 275 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 SETSIPP0DME0 302 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 ALDH3A1P30838 453 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 ADCY8P40145 1251 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 PHKA2P46019 1235 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 HTRA3P83110 453 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 OGDHQ02218 1023 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 KLF1Q13351 362 aaPredicted RBP15.74■□□□□ 0.11
CHFR-223ENST00000544268 HIC1Q14526 733 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 NUGGCQ68CJ6 796 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 ASRGL1Q7L266 308 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 INTS9Q9NV88 658 aaKnown RBP15.74■□□□□ 0.11
CHFR-223ENST00000544268 BLOC1S6Q9UL45 172 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 RRN3P2A6NIE6 340 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 E7ENQ6 273 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 F8VP50 259 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 TLR3O15455 904 aaKnown RBP15.74■□□□□ 0.11
CHFR-223ENST00000544268 FAM189A1O60320 539 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 LDHAP00338 332 aaKnown RBP15.74■□□□□ 0.11
CHFR-223ENST00000544268 WEE2P0C1S8 567 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 C6orf222P0C671 652 aaPredicted RBP15.74■□□□□ 0.11
CHFR-223ENST00000544268 PSEN2P49810 448 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 MTM1Q13496 603 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 NCOA4Q13772 614 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 MPP2Q14168 576 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 PPP1R15BQ5SWA1 713 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 CYP4A22Q5TCH4 519 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 ARHGAP22Q7Z5H3 698 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 USP37Q86T82 979 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 NLRP7Q8WX94 980 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 SLX1AQ9BQ83 275 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 GORASP1Q9BQQ3 440 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 WDR35Q9P2L0 1181 aa15.74■□□□□ 0.11
CHFR-223ENST00000544268 NRCAMQ92823 1304 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 HAS3O00219 553 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 OAS1P00973 400 aaKnown RBP15.73■□□□□ 0.11
CHFR-223ENST00000544268 PYGLP06737 847 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 ELNP15502 786 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 GNAZP19086 355 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 MYL6P60660 151 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 POU5F1BQ06416 359 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 CACNB2Q08289 660 aaPredicted RBP15.73■□□□□ 0.11
CHFR-223ENST00000544268 ZFYVE27Q5T4F4 411 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 ATF7IP2Q5U623 682 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 EEF1DP3Q658K8 133 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 FAM49AQ9H0Q0 323 aaPredicted RBP15.73■□□□□ 0.11
CHFR-223ENST00000544268 PTPRHQ9HD43 1115 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 SAE1Q9UBE0 346 aaPredicted RBP15.73■□□□□ 0.11
CHFR-223ENST00000544268 STK38LQ9Y2H1 464 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 C2CD2Q9Y426 696 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 USP15Q9Y4E8 981 aaPredicted RBP15.73■□□□□ 0.11
CHFR-223ENST00000544268 PIAS1O75925 651 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 UPP2O95045 317 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 PGK1P00558 417 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 PROZP22891 400 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 GBP1P32455 592 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 PURAQ00577 322 aaKnown RBP15.73■□□□□ 0.11
CHFR-223ENST00000544268 MCL1Q07820 350 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 TMEM62Q0P6H9 643 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 CLUL1Q15846 466 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 TRIM68Q6AZZ1 485 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 CAPN12Q6ZSI9 719 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 SPATA21Q7Z572 469 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 IFNLR1Q8IU57 520 aaPredicted RBP15.73■□□□□ 0.11
CHFR-223ENST00000544268 ANKRD42Q8N9B4 389 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 ZNF606Q8WXB4 792 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 AVENQ9NQS1 362 aaPredicted RBP15.73■□□□□ 0.11
CHFR-223ENST00000544268 NEU2Q9Y3R4 380 aa15.73■□□□□ 0.11
CHFR-223ENST00000544268 TRIP12Q14669 1992 aaPredicted RBP15.73■□□□□ 0.11
CHFR-223ENST00000544268 ATF7P17544 494 aaPredicted RBP15.72■□□□□ 0.11
CHFR-223ENST00000544268 VEGFBP49765 207 aa15.72■□□□□ 0.11
CHFR-223ENST00000544268 LMNB2Q03252 620 aa15.72■□□□□ 0.11
CHFR-223ENST00000544268 ENPEPQ07075 957 aa15.72■□□□□ 0.11
CHFR-223ENST00000544268 CUL3Q13618 768 aa15.72■□□□□ 0.11
CHFR-223ENST00000544268 AMHR2Q16671 573 aa15.72■□□□□ 0.11
CHFR-223ENST00000544268 C6orf118Q5T5N4 469 aa15.72■□□□□ 0.11
CHFR-223ENST00000544268 MPZL3Q6UWV2 235 aa15.72■□□□□ 0.11
CHFR-223ENST00000544268 ENOSF1Q7L5Y1 443 aa15.72■□□□□ 0.11
CHFR-223ENST00000544268 APBB1IPQ7Z5R6 666 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms