RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 RDH13Q8NBN7 331 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 MYCBPAPQ8TBZ2 947 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 DHX58Q96C10 678 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 PCED1BQ96HM7 432 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 ZC3H10Q96K80 434 aaKnown RBP18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 POLR3BQ9NW08 1133 aaPredicted RBP18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 ACACBO00763 2458 aa18.59■□□□□ 0.57
PPP1CA-210ENST00000542876 EPG5Q9HCE0 2579 aa18.58■□□□□ 0.57
PPP1CA-210ENST00000542876 RHOBTB1O94844 696 aa18.58■□□□□ 0.56
PPP1CA-210ENST00000542876 SNRPFP62306 86 aaKnown RBP18.58■□□□□ 0.56
PPP1CA-210ENST00000542876 TRPC3Q13507 836 aa18.58■□□□□ 0.56
PPP1CA-210ENST00000542876 MDH1BQ5I0G3 518 aa18.58■□□□□ 0.56
PPP1CA-210ENST00000542876 OR6B3Q8NGW1 331 aa18.58■□□□□ 0.56
PPP1CA-210ENST00000542876 ZNF507Q8TCN5 953 aa18.58■□□□□ 0.56
PPP1CA-210ENST00000542876 CCDC127Q96BQ5 260 aa18.58■□□□□ 0.56
PPP1CA-210ENST00000542876 LINC00597Q9H2U6 94 aa18.58■□□□□ 0.56
PPP1CA-210ENST00000542876 AGPAT3Q9NRZ7 376 aa18.58■□□□□ 0.56
PPP1CA-210ENST00000542876 UBE4BO95155 1302 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 KIF26AQ9ULI4 1882 aaPredicted RBP18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 TACC1O75410 805 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 ABL1P00519 1130 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 FAM163BP0C2L3 166 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 HOXD13P35453 343 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 MPLP40238 635 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 CYP2J2P51589 502 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 DGKEP52429 567 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 PSMD6Q15008 389 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 E2F4Q16254 413 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 WDR72Q3MJ13 1102 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 PLK5Q496M5 336 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 TDRD10Q5VZ19 366 aaKnown RBP18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 XXYLT1Q8NBI6 393 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 TSTD1Q8NFU3 115 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 C8orf48Q96LL4 319 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 SLITRK1Q96PX8 696 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 CGRRF1Q99675 332 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 MRPL45Q9BRJ2 306 aaKnown RBP18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 VPS45Q9NRW7 570 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 TFIP11Q9UBB9 837 aaKnown RBP18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 EBF1Q9UH73 591 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 SDK1Q7Z5N4 2213 aa18.57■□□□□ 0.56
PPP1CA-210ENST00000542876 ZNF840PA6NDX5 716 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 F8VP50 259 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 K7ELQ4 463 aaPredicted RBP18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 LEFTY2O00292 366 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 SLC9A3R1O14745 358 aaPredicted RBP18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 CLIC2O15247 247 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 CUTAO60888 179 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 CLSTN1O94985 981 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 CST3P01034 146 aaPredicted RBP18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 GBP1P32455 592 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 USP46P62068 366 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 NOP14P78316 857 aaKnown RBP18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 CNNM4Q6P4Q7 775 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 EPM2AIP1Q7L775 607 aaPredicted RBP18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 C11orf74Q86VG3 221 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 NELFCDQ8IXH7 590 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 EZH1Q92800 747 aaPredicted RBP18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 CHAMP1Q96JM3 812 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 TTLL2Q9BWV7 592 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 ELOVL4Q9GZR5 314 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 MAGEF1Q9HAY2 307 aa18.56■□□□□ 0.56
PPP1CA-210ENST00000542876 ZNF638Q14966 1978 aaKnown RBP18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 A8MXQ7 604 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 PHACTR2O75167 634 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 YEATS4O95619 227 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 PTPN1P18031 435 aaKnown RBP18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 SEC13P55735 322 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 SLC7A9P82251 487 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 CREB5Q02930 508 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 CYP24A1Q07973 514 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 USP39Q53GS9 565 aaKnown RBP18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 PLA2G2CQ5R387 149 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 STPG1Q5TH74 334 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 UNC13DQ70J99 1090 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 FILIP1Q7Z7B0 1213 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 KIAA1958Q8N8K9 716 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 C7orf25Q9BPX7 421 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 DUSP15Q9H1R2 295 aaPredicted RBP18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 CGNQ9P2M7 1197 aaKnown RBP18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 CPQQ9Y646 472 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 CACNA1BQ00975 2339 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 DENND4CQ5VZ89 1909 aa18.55■□□□□ 0.56
PPP1CA-210ENST00000542876 TGFB1I1O43294 461 aa18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 ATICP31939 592 aa18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 IFRD2Q12894 506 aaPredicted RBP18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 TAF10Q12962 218 aa18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 C2orf27AQ580R0 203 aa18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 RNF43Q68DV7 783 aa18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 DDX42Q86XP3 938 aaKnown RBP eCLIP18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 USP33Q8TEY7 942 aa18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 SYAP1Q96A49 352 aaPredicted RBP18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 SMOC1Q9H4F8 434 aa18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 RXFP3Q9NSD7 469 aa18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 SMPD4Q9NXE4 827 aa18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 NXF1Q9UBU9 619 aaKnown RBP18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 RALGAPA1Q6GYQ0 2036 aa18.54■□□□□ 0.56
PPP1CA-210ENST00000542876 ATP8B3O60423 1300 aa18.53■□□□□ 0.56
PPP1CA-210ENST00000542876 DCLK1O15075 740 aa18.53■□□□□ 0.56
PPP1CA-210ENST00000542876 POLR2DO15514 142 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms