RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 GAS2O43903 313 aaKnown RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 GH1P01241 217 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 ABHD2P08910 425 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 EIF4BP23588 611 aaKnown RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 PTGIRP43119 386 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 HADHBP55084 474 aaKnown RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 RPL7AP62424 266 aaKnown RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 POU5F1BQ06416 359 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 Q3C1V9 767 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 RAB44Q7Z6P3 723 aaPredicted RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 APOBEC3FQ8IUX4 373 aaKnown RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 IL31RAQ8NI17 732 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 NACA2Q9H009 215 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 KIF9Q9HAQ2 790 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 STRCP1A6NGW2 1772 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 DUOX1Q9NRD9 1551 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 PLIN4Q96Q06 1357 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 C5orf60A6NFR6 353 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 POLBP06746 335 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 SPRP35270 261 aaPredicted RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 TAS2R40P59535 323 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 MRPS9P82933 396 aaKnown RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 CNGA3Q16281 694 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 LRRC38Q5VT99 294 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 TRABD2AQ86V40 505 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 VSIG10LQ86VR7 867 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 TMPRSS6Q8IU80 811 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 CHST13Q8NET6 341 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 MAGEC3Q8TD91 643 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 RXFP2Q8WXD0 754 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 SHCBP1LQ9BZQ2 653 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 FHDC1Q9C0D6 1143 aaPredicted RBP8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 ZDHHC18Q9NUE0 388 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 GTSE1Q9NYZ3 720 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 MYH6P13533 1939 aa8.54□□□□□ -1.04
PRKAB1-207ENST00000542698 RPTORQ8N122 1335 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 FCHO1O14526 889 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 AIM2O14862 343 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 PDGFRBP09619 1106 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 VDRP11473 427 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 TAC1P20366 129 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 CDC25CP30307 473 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 SKIV2L2P42285 1042 aaKnown RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 COPAP53621 1224 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 PTPN11Q06124 597 aaPredicted RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 SPIRE1Q08AE8 756 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 PDK2Q15119 407 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 TRIM67Q6ZTA4 783 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 PIGWQ7Z7B1 504 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 TNIP3Q96KP6 325 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 VPS33BQ9H267 617 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 C10orf88Q9H8K7 445 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 MRPL40Q9NQ50 206 aaKnown RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 R3HDM2Q9Y2K5 976 aaKnown RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 E7ENQ6 273 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ADCY3O60266 1144 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 HBP1O60381 514 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 PIAS1O75925 651 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ZCCHC18P0CG32 403 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 PAMP19021 973 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 NOMO3P69849 1222 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 BNIP1Q12981 228 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 TBCCQ15814 346 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 SPDYE2Q495Y8 402 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ITPRIPL1Q6GPH6 555 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 LLGL2Q6P1M3 1020 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ZDHHC24Q6UX98 284 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 DSTYKQ6XUX3 929 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 SAMD7Q7Z3H4 446 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 RYBPQ8N488 228 aaPredicted RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 FITM2Q8N6M3 262 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 HELQQ8TDG4 1101 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 LENG9Q96B70 501 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 PPP1R36Q96LQ0 422 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 SLITRK1Q96PX8 696 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 INPP5FQ9Y2H2 1132 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 CDY2AQ9Y6F7 541 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 CDY1Q9Y6F8 540 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 PHLPP1O60346 1717 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ATP8B3O60423 1300 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ASTN2O75129 1339 aaPredicted RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ALS2Q96Q42 1657 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ARHGAP10A1A4S6 786 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 KBTBD13C9JR72 458 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 VWA5AO00534 786 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 NEMP1O14524 444 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ALOX15BO15296 676 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 MGRN1O60291 552 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 LYPLA2O95372 231 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 CREB1P16220 341 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 RFC1P35251 1148 aaPredicted RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 GCLCP48506 637 aaPredicted RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 PEX5P50542 639 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 FAAP100Q0VG06 881 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ZNF268Q14587 947 aaPredicted RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 FASTKD1Q53R41 847 aaKnown RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 MPZL3Q6UWV2 235 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 ZPBP2Q6X784 338 aa8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 APLFQ8IW19 511 aaPredicted RBP8.53□□□□□ -1.04
PRKAB1-207ENST00000542698 FAM84AQ96KN4 292 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms