RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 MYH10P35580 1976 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.66■□□□□ 0.26
VPS33A-206ENST00000542310 A0A1B0GVL5 298 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 LRRIQ3A6PVS8 624 aaPredicted RBP16.66■□□□□ 0.26
VPS33A-206ENST00000542310 K7ESF4 209 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 PHACTR2O75167 634 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 PDGFRBP09619 1106 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 GRSF1Q12849 480 aaKnown RBP eCLIP16.66■□□□□ 0.26
VPS33A-206ENST00000542310 BIRC3Q13489 604 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 ZNF699Q32M78 642 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 TRIM68Q6AZZ1 485 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 SPRYD3Q8NCJ5 442 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 PLEKHO2Q8TD55 490 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 CHFRQ96EP1 664 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 GMEB2Q9UKD1 530 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 RAB23Q9ULC3 237 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 CACNA1AO00555 2505 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 SPAG17Q6Q759 2223 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 ATP8B3O60423 1300 aa16.66■□□□□ 0.26
VPS33A-206ENST00000542310 CEP250Q9BV73 2442 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 C2orf78A6NCI8 922 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 A8MXQ7 604 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 F8VP50 259 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 MAPK13O15264 365 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 OLFM2O95897 454 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 NR3C1P04150 777 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 P4HA1P13674 534 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 ARSAP15289 507 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 PTPN1P18031 435 aaKnown RBP16.65■□□□□ 0.26
VPS33A-206ENST00000542310 SYKP43405 635 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 IFNAR2P48551 515 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 CASP4P49662 377 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 NCOA4Q13772 614 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 NFIL3Q16649 462 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 FBXO43Q4G163 708 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 ZNF667Q5HYK9 610 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 LAIR1Q6GTX8 287 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 LONP2Q86WA8 852 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 ARL14EPQ8N8R7 260 aaPredicted RBP16.65■□□□□ 0.26
VPS33A-206ENST00000542310 TMC2Q8TDI7 906 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 CCDC47Q96A33 483 aaKnown RBP16.65■□□□□ 0.26
VPS33A-206ENST00000542310 SLC22A12Q96S37 553 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 SCAND2PQ9GZW5 306 aaPredicted RBP16.65■□□□□ 0.26
VPS33A-206ENST00000542310 DPEP3Q9H4B8 488 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 DUS2Q9NX74 493 aaKnown RBP16.65■□□□□ 0.26
VPS33A-206ENST00000542310 TRPM5Q9NZQ8 1165 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 NXF1Q9UBU9 619 aaKnown RBP16.65■□□□□ 0.26
VPS33A-206ENST00000542310 TRAF3IP3Q9Y228 551 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 ZDHHC9Q9Y397 364 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 DNAH14Q0VDD8 3507 aa16.65■□□□□ 0.26
VPS33A-206ENST00000542310 A0A1W2PQ27 194 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 A0A1W2PQ64 194 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 A0A1W2PQD8 194 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 OTOL1A6NHN0 477 aaPredicted RBP16.64■□□□□ 0.25
VPS33A-206ENST00000542310 CALUO43852 315 aaPredicted RBP16.64■□□□□ 0.25
VPS33A-206ENST00000542310 LRP3O75074 770 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 ATG13O75143 517 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 RHOBTB3O94955 611 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 C4BPAP04003 597 aaKnown RBP16.64■□□□□ 0.25
VPS33A-206ENST00000542310 RPN1P04843 607 aaKnown RBP16.64■□□□□ 0.25
VPS33A-206ENST00000542310 HDCP19113 662 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 DRD1P21728 446 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 USP46P62068 366 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 ENPEPQ07075 957 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 EML3Q32P44 896 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 ZACNQ401N2 412 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 FSTL4Q6MZW2 842 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 WDR5BQ86VZ2 330 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 DCLK2Q8N568 766 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 PDZD8Q8NEN9 1154 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 SH3RF2Q8TEC5 729 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 OVCA2Q8WZ82 227 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 TAF4BQ92750 862 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 TNIP3Q96KP6 325 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 SLITRK1Q96PX8 696 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 SMYD3Q9H7B4 428 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 ECT2Q9H8V3 914 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 EML5Q05BV3 1969 aa16.64■□□□□ 0.25
VPS33A-206ENST00000542310 RALGAPA1Q6GYQ0 2036 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 CCDC163A0A0D9SF12 145 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 ZNF840PA6NDX5 716 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 CHURC1-FNTBB4DL54 471 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 IKBKBO14920 756 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 RTN3O95197 1032 aaPredicted RBP16.63■□□□□ 0.25
VPS33A-206ENST00000542310 NFATC1O95644 943 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 OAS1P00973 400 aaKnown RBP16.63■□□□□ 0.25
VPS33A-206ENST00000542310 GJA4P35212 333 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 NDUFA8P51970 172 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 SLC7A9P82251 487 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 RMDN1Q96DB5 314 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 CYP2S1Q96SQ9 504 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 P2RY13Q9BPV8 354 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 ZNF518BQ9C0D4 1074 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 FRMD4BQ9Y2L6 1034 aa16.63■□□□□ 0.25
VPS33A-206ENST00000542310 ATG2BQ96BY7 2078 aa16.62■□□□□ 0.25
VPS33A-206ENST00000542310 VNN1O95497 513 aa16.62■□□□□ 0.25
VPS33A-206ENST00000542310 SDHBP21912 280 aa16.62■□□□□ 0.25
VPS33A-206ENST00000542310 FNTBP49356 437 aa16.62■□□□□ 0.25
VPS33A-206ENST00000542310 LMNB2Q03252 620 aa16.62■□□□□ 0.25
VPS33A-206ENST00000542310 DPYDQ12882 1025 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms