RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 HCFC1R1Q9NWW0 138 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 EPS15L1Q9UBC2 864 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 CDH7Q9ULB5 785 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 MYO6Q9UM54 1294 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 NCANO14594 1321 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 C19orf67A6NJJ6 358 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 LOC730098B7Z3J9 87 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 O00370 1275 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 HMGA1P17096 107 aaKnown RBP19.86■□□□□ 0.77
VPS33A-205ENST00000541169 ADORA2BP29275 332 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 USP8P40818 1118 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 BST2Q10589 180 aaKnown RBP19.86■□□□□ 0.77
VPS33A-205ENST00000541169 DRAP1Q14919 205 aaPredicted RBP19.86■□□□□ 0.77
VPS33A-205ENST00000541169 CCDC142Q17RM4 750 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 PRSS36Q5K4E3 855 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 CLEC20AQ6ZU45 233 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 TMC8Q8IU68 726 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 GIPC2Q8TF65 315 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 SPAG5Q96R06 1193 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 GANQ9H2C0 597 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.86■□□□□ 0.77
VPS33A-205ENST00000541169 PRUNE2Q8WUY3 3088 aa19.86■□□□□ 0.77
VPS33A-205ENST00000541169 RNF225M0QZC1 329 aaPredicted RBP19.85■□□□□ 0.77
VPS33A-205ENST00000541169 MYL4P12829 197 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 YWHAQP27348 245 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 WEE1P30291 646 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 GNA15P30679 374 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 GBP2P32456 591 aaPredicted RBP19.85■□□□□ 0.77
VPS33A-205ENST00000541169 MAP3K7CLP57077 242 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 POLR2FP61218 127 aaKnown RBP19.85■□□□□ 0.77
VPS33A-205ENST00000541169 GJB7Q6PEY0 223 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 MTSS1LQ765P7 747 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 CACNA2D4Q7Z3S7 1137 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 KCNK16Q96T55 309 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 SMOQ99835 787 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 IL37Q9NZH6 218 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 TSPAN16Q9UKR8 245 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 FHOD1Q9Y613 1164 aa19.85■□□□□ 0.77
VPS33A-205ENST00000541169 MYH10P35580 1976 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 F8VZ95 297 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 FOXN3O00409 490 aaPredicted RBP19.84■□□□□ 0.77
VPS33A-205ENST00000541169 XPO1O14980 1071 aaKnown RBP19.84■□□□□ 0.77
VPS33A-205ENST00000541169 LAMP2P13473 410 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 GABRR2P28476 465 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 STAT1P42224 750 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 SNX16P57768 344 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 GOLGA7BQ2TAP0 167 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 FIGNQ5HY92 759 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 GET4Q7L5D6 327 aaPredicted RBP19.84■□□□□ 0.77
VPS33A-205ENST00000541169 ADAMTS19Q8TE59 1207 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 ZNF606Q8WXB4 792 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 MRPS31Q92665 395 aaKnown RBP19.84■□□□□ 0.77
VPS33A-205ENST00000541169 FGF13Q92913 245 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 E2F7Q96AV8 911 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 RPGRIP1Q96KN7 1286 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 IGSF9Q9P2J2 1179 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 MAGED2Q9UNF1 606 aaPredicted RBP19.84■□□□□ 0.77
VPS33A-205ENST00000541169 GREB1Q4ZG55 1949 aa19.84■□□□□ 0.77
VPS33A-205ENST00000541169 FAM92AA1XBS5 289 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 TNFRSF10BO14763 440 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 PLA2G4AP47712 749 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 GPR15P49685 360 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 SLC5A3P53794 718 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 NTHL1P78549 312 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 GAREM2Q75VX8 874 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 ZNF677Q86XU0 584 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 STKLD1Q8NE28 680 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 ZMIZ2Q8NF64 920 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 GPR152Q8TDT2 470 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 STK32AQ8WU08 396 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 KCTD13Q8WZ19 329 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 NAP1L5Q96NT1 182 aaPredicted RBP19.83■□□□□ 0.77
VPS33A-205ENST00000541169 NUCKS1Q9H1E3 243 aaKnown RBP19.83■□□□□ 0.77
VPS33A-205ENST00000541169 ATXN3LQ9H3M9 355 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 IL21Q9HBE4 155 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 CYLDQ9NQC7 956 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 TRPM5Q9NZQ8 1165 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 PCDHGC3Q9UN70 934 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 CEP83Q9Y592 693 aa19.83■□□□□ 0.77
VPS33A-205ENST00000541169 NOTCH4Q99466 2003 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 PATJQ8NI35 1801 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 CYP26A1O43174 497 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 TEX33O43247 280 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 THAP12O43422 761 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 F11P03951 625 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 KRT9P35527 623 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 SOX5P35711 763 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 PSEN1P49768 467 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 CACNA2D1P54289 1103 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 JAM2P57087 298 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 APBA1Q02410 837 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 SLC5A9Q2M3M2 681 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 PKDCCQ504Y2 493 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 NPAS3Q8IXF0 933 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 HS6ST3Q8IZP7 471 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 GJD3Q8N144 294 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 ARHGAP18Q8N392 663 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 ITFG1Q8TB96 612 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 SHKBP1Q8TBC3 707 aa19.82■□□□□ 0.76
VPS33A-205ENST00000541169 TFAP2BQ92481 460 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms