RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 DCAF8L1A6NGE4 600 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 B2RBV5 119 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 H0YIN7 160 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 K7ERI5 159 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 ATP5HO75947 161 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 ZWINTO95229 277 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 PSMG1O95456 288 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 JAK3P52333 1124 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 IRX1P78414 480 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 TFAMQ00059 246 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 C1QBPQ07021 282 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 RASA2Q15283 850 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 TSNAXIP1Q2TAA8 658 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 WASHC2DQ5SRD0 308 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 ADGRD1Q6QNK2 874 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 ENOSF1Q7L5Y1 443 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 SKA1Q96BD8 255 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 NSL1Q96IY1 281 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 PPP1R16BQ96T49 567 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 EBF4Q9BQW3 602 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 NTPCRQ9BSD7 190 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 MAGEB5Q9BZ81 275 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 ACSS3Q9H6R3 686 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 SLC38A10Q9HBR0 1119 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 RNF146Q9NTX7 359 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 PPARGC1AQ9UBK2 798 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 SLC9A2Q9UBY0 812 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 SHOC2Q9UQ13 582 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 CTDP1Q9Y5B0 961 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 LOXHD1Q8IVV2 1947 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 CNTNAP2Q9UHC6 1331 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 TCRBV5S1A1TA0A578 114 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 TRIM49D1C9J1S8 452 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 ATP2A1O14983 1001 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 CCDC22O60826 627 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 ETS2P15036 469 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 KCNA2P16389 499 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 KCNA3P22001 575 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 GARTP22102 1010 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 PGM1P36871 562 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 BPIFB4P59827 614 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 KRT76Q01546 638 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 USP37Q86T82 979 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 PPIL6Q8IXY8 311 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 NLGN1Q8N2Q7 840 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 POU5F2Q8N7G0 328 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 RBM15BQ8NDT2 890 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 TMEM174Q8WUU8 243 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 MRIQ9BWK5 157 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 RPAP3Q9H6T3 665 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 PACSIN3Q9UKS6 424 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 CLGNO14967 610 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 RBP3P10745 1247 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 VHLP40337 213 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 EIF3EP60228 445 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 CDK16Q00536 496 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 SLC25A11Q02978 314 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 TRAF1Q13077 416 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 SLC27A3Q5K4L6 730 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 EEPD1Q7L9B9 569 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZNF677Q86XU0 584 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 OXNAD1Q96HP4 312 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 CPXM1Q96SM3 734 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 THTPAQ9BU02 230 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 SMYD2Q9NRG4 433 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 PAPOLBQ9NRJ5 636 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 IL1RAPL1Q9NZN1 696 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 SLC24A2Q9UI40 661 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 LYPLA1O75608 230 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 ITGAVP06756 1048 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 POTEJP0CG39 1038 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 ETV4P43268 484 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 SERPINB4P48594 390 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 BST1Q10588 318 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 OR52E8Q6IFG1 317 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 TMEM192Q8IY95 271 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 DEPTORQ8TB45 409 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 SPATA18Q8TC71 538 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 NKD2Q969F2 451 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 PEBP4Q96S96 227 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 SRPK1Q96SB4 655 aaKnown RBP10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 SMYD3Q9H7B4 428 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 JPH1Q9HDC5 661 aaPredicted RBP10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 PDLIM7Q9NR12 457 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 ACSS2Q9NR19 701 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 PPM1HQ9ULR3 514 aa10.83□□□□□ -0.68
CDC42SE1-207ENST00000540998 TRAFD1O14545 582 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 NPM3O75607 178 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 KRT19P08727 400 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 SRGAP2CP0DJJ0 459 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 ACADSP16219 412 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 LMNB2Q03252 620 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 PRKD1Q15139 912 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 C15orf59Q2T9L4 293 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 ARMC3Q5W041 872 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 C16orf46Q6P387 395 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 TRMT10BQ6PF06 316 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 MCF2L2Q86YR7 1114 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 THNSL1Q8IYQ7 743 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 TEX9Q8N6V9 391 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms