RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 CLIC2O15247 247 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 PPP6R2O75170 966 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 AKAP3O75969 853 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 CYP2J2P51589 502 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 CACNA2D1P54289 1103 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 CYP24A1Q07973 514 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 PSMD2Q13200 908 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 DMC1Q14565 340 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 SNRNP35Q16560 246 aaKnown RBP17.34■□□□□ 0.37
TRIM65-203ENST00000540812 PLK5Q496M5 336 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 FAM26FQ5R3K3 315 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 SHC4Q6S5L8 630 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 SYT13Q7L8C5 426 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 NELFCDQ8IXH7 590 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 SCFD1Q8WVM8 642 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 SNX21Q969T3 373 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 CCDC127Q96BQ5 260 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 TTLL2Q9BWV7 592 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 DPEP3Q9H4B8 488 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 KIAA1586Q9HCI6 787 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 TMEM30AQ9NV96 361 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 TRPM5Q9NZQ8 1165 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 ZFHX4Q86UP3 3567 aa17.34■□□□□ 0.37
TRIM65-203ENST00000540812 MAP1BP46821 2468 aaKnown RBP17.33■□□□□ 0.37
TRIM65-203ENST00000540812 PTPRDP23468 1912 aa17.33■□□□□ 0.37
TRIM65-203ENST00000540812 KMT2BQ9UMN6 2715 aaPredicted RBP17.33■□□□□ 0.36
TRIM65-203ENST00000540812 ZNF840PA6NDX5 716 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 F8VP50 259 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 LEFTY2O00292 366 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 FOXD2O60548 495 aaPredicted RBP17.33■□□□□ 0.36
TRIM65-203ENST00000540812 APBB3O95704 486 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 ZNF806P0C7X5 589 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 TNNI1P19237 187 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 KCNA4P22459 653 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 ANXA13P27216 316 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 CASP1P29466 404 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 GNL1P36915 607 aaPredicted RBP17.33■□□□□ 0.36
TRIM65-203ENST00000540812 OPRD1P41143 372 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 PSMD6Q15008 389 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 MAPRE1Q15691 268 aaKnown RBP17.33■□□□□ 0.36
TRIM65-203ENST00000540812 GAB4Q2WGN9 574 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 PLA2G2CQ5R387 149 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 CNNM4Q6P4Q7 775 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 C12orf50Q8NA57 414 aaPredicted RBP17.33■□□□□ 0.36
TRIM65-203ENST00000540812 EXOC4Q96A65 974 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 ZC3H10Q96K80 434 aaKnown RBP17.33■□□□□ 0.36
TRIM65-203ENST00000540812 FNBP1Q96RU3 617 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 CGRRF1Q99675 332 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 C7orf25Q9BPX7 421 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 LRRC27Q9C0I9 530 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 GZF1Q9H116 711 aaPredicted RBP17.33■□□□□ 0.36
TRIM65-203ENST00000540812 SNX25Q9H3E2 840 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 CUEDC2Q9H467 287 aa17.33■□□□□ 0.36
TRIM65-203ENST00000540812 K7ELQ4 463 aaPredicted RBP17.32■□□□□ 0.36
TRIM65-203ENST00000540812 SCAMP3O14828 347 aaKnown RBP17.32■□□□□ 0.36
TRIM65-203ENST00000540812 TRIM66O15016 1216 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 TACC1O75410 805 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 NFATC1O95644 943 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 MPLP40238 635 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 LIMK1P53667 647 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 AMPD3Q01432 767 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 EHHADHQ08426 723 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 NR1H3Q13133 447 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 FOXD4L5Q5VV16 416 aaPredicted RBP17.32■□□□□ 0.36
TRIM65-203ENST00000540812 IL31Q6EBC2 164 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 HS2ST1Q7LGA3 356 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 IQUBQ8NA54 791 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 OR6B3Q8NGW1 331 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 FOXD4L4Q8WXT5 416 aaPredicted RBP17.32■□□□□ 0.36
TRIM65-203ENST00000540812 ZNF516Q92618 1163 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 ACDQ96AP0 544 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 C8orf48Q96LL4 319 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 CEP295NLQ96MC4 621 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 ZNF518BQ9C0D4 1074 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 RNF38Q9H0F5 515 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 DUSP15Q9H1R2 295 aaPredicted RBP17.32■□□□□ 0.36
TRIM65-203ENST00000540812 EBF1Q9UH73 591 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 MYO16Q9Y6X6 1858 aa17.32■□□□□ 0.36
TRIM65-203ENST00000540812 KIAA1549LQ6ZVL6 1849 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 UBE4BO95155 1302 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 K7EQS6 105 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 CLDN5O00501 218 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 TM4SF5O14894 197 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 PFKLP17858 780 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 PTPN1P18031 435 aaKnown RBP17.31■□□□□ 0.36
TRIM65-203ENST00000540812 PDE6CP51160 858 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 SEC13P55735 322 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 NOP14P78316 857 aaKnown RBP17.31■□□□□ 0.36
TRIM65-203ENST00000540812 SLC7A9P82251 487 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 WDR72Q3MJ13 1102 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 TCEAL6Q6IPX3 200 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 UNC13DQ70J99 1090 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 FILIP1Q7Z7B0 1213 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 XXYLT1Q8NBI6 393 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 USP33Q8TEY7 942 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 TCEAL3Q969E4 200 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 B3GNT5Q9BYG0 378 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 XYLT2Q9H1B5 865 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 BLZF1Q9H2G9 400 aa17.31■□□□□ 0.36
TRIM65-203ENST00000540812 SMPD4Q9NXE4 827 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms