RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 CLLU1OSQ5K130 101 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 KIAA0319Q5VV43 1072 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 KAZNQ674X7 775 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 TXNRD3NBQ6F5E7 133 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 GLB1LQ6UWU2 654 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 CCNI2Q6ZMN8 369 aaPredicted RBP10.04□□□□□ -0.8
PAAF1-209ENST00000540659 LIMS2Q7Z4I7 341 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 METTL23Q86XA0 190 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 ZNF280BQ86YH2 543 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 SCUBE3Q8IX30 993 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 TMEM86AQ8N2M4 240 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 ANKRD52Q8NB46 1076 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 DBF4BQ8NFT6 615 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 CCDC26Q8TAB7 109 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 SLC35F5Q8WV83 523 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 RXFP2Q8WXD0 754 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 CASKIN2Q8WXE0 1202 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 GDAP1L1Q96MZ0 367 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 UROC1Q96N76 676 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 FAM193BQ96PV7 902 aaPredicted RBP10.04□□□□□ -0.8
PAAF1-209ENST00000540659 SYT15Q9BQS2 421 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 HEMGNQ9BXL5 484 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 B3GNT5Q9BYG0 378 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 KANSL3Q9P2N6 904 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 PCSK1NQ9UHG2 260 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 MTUS1Q9ULD2 1270 aa10.04□□□□□ -0.8
PAAF1-209ENST00000540659 SPDYE4A6NLX3 237 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 GABRDO14764 452 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 EFCAB14O75071 495 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 BEST1O76090 585 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 ZRANB2O95218 330 aaKnown RBP eCLIP10.03□□□□□ -0.8
PAAF1-209ENST00000540659 ITGB1P05556 798 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 RARAP10276 462 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 RALAP11233 206 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 RFC2P35250 354 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 GATMP50440 423 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 MAP3K7CLP57077 242 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 DR1Q01658 176 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 SLC6A3Q01959 620 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 TLE2Q04725 743 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 RNASELQ05823 741 aaKnown RBP10.03□□□□□ -0.8
PAAF1-209ENST00000540659 SNX1Q13596 522 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 GPNMBQ14956 572 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 TAF5Q15542 800 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 HADHQ16836 314 aaKnown RBP10.03□□□□□ -0.8
PAAF1-209ENST00000540659 TCTN1Q2MV58 587 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 C15orf59Q2T9L4 293 aaPredicted RBP10.03□□□□□ -0.8
PAAF1-209ENST00000540659 SMTNL2Q2TAL5 461 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 RAB6CQ53S08 254 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 NOMO2Q5JPE7 1267 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 BEND6Q5SZJ8 279 aaPredicted RBP10.03□□□□□ -0.8
PAAF1-209ENST00000540659 SH3PXD2AQ5TCZ1 1133 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 DEFB128Q7Z7B8 93 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 IFT20Q8IY31 132 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 KATNAL2Q8IYT4 538 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 ZDHHC14Q8IZN3 488 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 PRELID2Q8N945 189 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 HNRNPLLQ8WVV9 542 aaKnown RBP10.03□□□□□ -0.8
PAAF1-209ENST00000540659 C1orf54Q8WWF1 131 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 HSPH1Q92598 858 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 SEPT8Q92599 483 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 MAGOHBQ96A72 148 aaKnown RBP10.03□□□□□ -0.8
PAAF1-209ENST00000540659 CFAP57Q96MR6 1250 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 HERPUD2Q9BSE4 406 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 TRIM51Q9BSJ1 452 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 SLC4A5Q9BY07 1137 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 TRIM31Q9BZY9 425 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 RAB6CQ9H0N0 254 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 DPH5Q9H2P9 285 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 SLITRK6Q9H5Y7 841 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 CRTAC1Q9NQ79 661 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 PRDM5Q9NQX1 630 aaPredicted RBP10.03□□□□□ -0.8
PAAF1-209ENST00000540659 GDF3Q9NR23 364 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 ASNSD1Q9NWL6 643 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 LRFN2Q9ULH4 789 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 PCDHB7Q9Y5E2 793 aa10.03□□□□□ -0.8
PAAF1-209ENST00000540659 NLRC5Q86WI3 1866 aa10.02□□□□□ -0.8
PAAF1-209ENST00000540659 MYBPHLA2RUH7 354 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 TRIM43BA6NCK2 446 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 ENPP3O14638 875 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 FSCN2O14926 492 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 XPO1O14980 1071 aaKnown RBP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 PAPSS1O43252 624 aaPredicted RBP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 B4GALT3O60512 393 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 LRCH4O75427 683 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 GABBR2O75899 941 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 RNF8O76064 485 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 CLTBP09497 229 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 FAM200BP0CF97 657 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 KRT10P13645 584 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 PDGFRAP16234 1089 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 FLT3P36888 993 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 CETN2P41208 172 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 KCNJ1P48048 391 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 CARSP49589 748 aaKnown RBP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 BCAR1P56945 870 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 SLC8A3P57103 927 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 ATP11AP98196 1134 aa10.02□□□□□ -0.81
PAAF1-209ENST00000540659 SIX1Q15475 284 aaPredicted RBP10.02□□□□□ -0.81
PAAF1-209ENST00000540659 TRADDQ15628 312 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms