RNA–Protein interactions for RNA: ENST00000540643.5

SFI1-229, Transcript of SFI1 centrin binding protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SFI1, Length 4,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFI1-229ENST00000540643 ALFQ53S48 1182 aa13.46□□□□□ -0.25
SFI1-229ENST00000540643 ARL6IP4Q66PJ3 421 aaKnown RBP13.46□□□□□ -0.25
SFI1-229ENST00000540643 ERICH5Q6P6B1 374 aa13.46□□□□□ -0.25
SFI1-229ENST00000540643 MMAAQ8IVH4 418 aaKnown RBP13.46□□□□□ -0.25
SFI1-229ENST00000540643 PBXIP1Q96AQ6 731 aa13.46□□□□□ -0.25
SFI1-229ENST00000540643 EAF2Q96CJ1 260 aaPredicted RBP13.46□□□□□ -0.25
SFI1-229ENST00000540643 MTMR12Q9C0I1 747 aa13.46□□□□□ -0.25
SFI1-229ENST00000540643 CDC42EP4Q9H3Q1 356 aaKnown RBP13.46□□□□□ -0.25
SFI1-229ENST00000540643 SYNDIG1Q9H7V2 258 aa13.46□□□□□ -0.25
SFI1-229ENST00000540643 AVENQ9NQS1 362 aaPredicted RBP13.46□□□□□ -0.25
SFI1-229ENST00000540643 CUEDC1Q9NWM3 386 aaPredicted RBP13.46□□□□□ -0.25
SFI1-229ENST00000540643 MPP6Q9NZW5 540 aa13.46□□□□□ -0.25
SFI1-229ENST00000540643 VANGL2Q9ULK5 521 aa13.46□□□□□ -0.25
SFI1-229ENST00000540643 STON1Q9Y6Q2 735 aa13.46□□□□□ -0.25
SFI1-229ENST00000540643 ESYT2A0FGR8 921 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 KRT87PA6NCN2 255 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 CCNT2O60583 730 aaKnown RBP13.46□□□□□ -0.26
SFI1-229ENST00000540643 CLASP2O75122 1294 aaKnown RBP13.46□□□□□ -0.26
SFI1-229ENST00000540643 IFNA14P01570 189 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 RARGP13631 454 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 WEE1P30291 646 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 MAPK4P31152 587 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 DNASE1L3Q13609 305 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 USP49Q70CQ1 688 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 LILRB4Q8NHJ6 448 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 SSH3Q8TE77 659 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 ASIC4Q96FT7 647 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 CNDP1Q96KN2 507 aa13.46□□□□□ -0.26
SFI1-229ENST00000540643 FBXO6Q9NRD1 293 aaPredicted RBP13.46□□□□□ -0.26
SFI1-229ENST00000540643 AATKQ6ZMQ8 1374 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 CLDN25C9JDP6 229 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 PRDM1O75626 825 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 PROCP04070 461 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 ZNF76P36508 570 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 HADHAP40939 763 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 CENPAP49450 140 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 SLC25A3Q00325 362 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 TFCP2Q12800 502 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 GNA13Q14344 377 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 BBS7Q8IWZ6 715 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 DTX3Q8N9I9 347 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 EDARQ9UNE0 448 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 PLCL2Q9UPR0 1127 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 CPS1P31327 1500 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 SAC3D1A6NKF1 404 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 TOP3AQ13472 1001 aaPredicted RBP13.45□□□□□ -0.26
SFI1-229ENST00000540643 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 CYP2A13Q16696 494 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 GARNL3Q5VVW2 1013 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 NET1Q7Z628 596 aaPredicted RBP13.45□□□□□ -0.26
SFI1-229ENST00000540643 SETD3Q86TU7 594 aaPredicted RBP13.45□□□□□ -0.26
SFI1-229ENST00000540643 CLEC4FQ8N1N0 589 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 OXER1Q8TDS5 423 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 EXOSC4Q9NPD3 245 aaKnown RBP13.45□□□□□ -0.26
SFI1-229ENST00000540643 ARL8BQ9NVJ2 186 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 NOX1Q9Y5S8 564 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 M0QX08 132 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 TK2O00142 265 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 TRIM24O15164 1050 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 CLOCKO15516 846 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 AMPD1P23109 780 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 HOXD13P35453 343 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 NFIAQ12857 509 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 E2F2Q14209 437 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 RBM20Q5T481 1227 aaKnown RBP13.45□□□□□ -0.26
SFI1-229ENST00000540643 PI4K2BQ8TCG2 481 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 SCYL1Q96KG9 808 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 CGREF1Q99674 301 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 TMEM246Q9BRR3 403 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 PHF20Q9BVI0 1012 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 CADM1Q9BY67 442 aaKnown RBP13.45□□□□□ -0.26
SFI1-229ENST00000540643 CNNM2Q9H8M5 875 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 NAALADL1Q9UQQ1 740 aa13.45□□□□□ -0.26
SFI1-229ENST00000540643 MYO3AQ8NEV4 1616 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 CENPBD1B2RD01 187 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 LRRN2O75325 713 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 MED26O95402 600 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 ALBP02768 609 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 DLATP10515 647 aaKnown RBP13.44□□□□□ -0.26
SFI1-229ENST00000540643 DLG1Q12959 904 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 DGUOKQ16854 277 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 ARMCX4Q5H9R4 360 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 C6orf52Q5T4I8 152 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 KLHL17Q6TDP4 642 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 C12orf50Q8NA57 414 aaPredicted RBP13.44□□□□□ -0.26
SFI1-229ENST00000540643 TMEM87BQ96K49 555 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 PRRG3Q9BZD7 231 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 CXorf21Q9HAI6 301 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.44□□□□□ -0.26
SFI1-229ENST00000540643 ST14Q9Y5Y6 855 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 PTPRUQ92729 1446 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 NEMP1O14524 444 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 STX7O15400 261 aaKnown RBP13.44□□□□□ -0.26
SFI1-229ENST00000540643 CPNE3O75131 537 aaKnown RBP13.44□□□□□ -0.26
SFI1-229ENST00000540643 GPD2P43304 727 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 MYBPC1Q00872 1141 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 MORF4L2Q15014 288 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 CLVS2Q5SYC1 327 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 KLHDC7AQ5VTJ3 777 aa13.44□□□□□ -0.26
SFI1-229ENST00000540643 IZUMO3Q5VZ72 239 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms