RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PSME4Q14997 1843 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 C3orf70A6NLC5 250 aaPredicted RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 C19orf81C9J6K1 198 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 KBTBD13C9JR72 458 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 MICAL2O94851 1124 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 ATG7O95352 703 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 GSTA1P08263 222 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 CPA2P48052 419 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 KBTBD12Q3ZCT8 623 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 MAP1SQ66K74 1059 aaPredicted RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 ZNF75CPQ92670 426 aaPredicted RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 NIFKQ9BYG3 293 aaKnown RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 SLC13A1Q9BZW2 595 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 PCDH9Q9HC56 1237 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 NKX1-2Q9UD57 310 aaPredicted RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 MCM8Q9UJA3 840 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 SYNJ2BP-COX16A0A087WUM0 186 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 E2F8A0AVK6 867 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 CFAP69A5D8W1 941 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 ZBTB42B2RXF5 422 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 E5RJQ4 531 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 ALOX15BO15296 676 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 UGT1A9O60656 530 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 RNF8O76064 485 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 ELF1P32519 619 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 ARL4CP56559 192 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 GEMIN4P57678 1058 aaKnown RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 PPP1R15BQ5SWA1 713 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 BSPRYQ5W0U4 402 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 TRNP1Q6NT89 227 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 PRPF39Q86UA1 669 aaKnown RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 XYLT1Q86Y38 959 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 SLC35B2Q8TB61 432 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 UGT1A7Q9HAW7 530 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 UGT1A10Q9HAW8 530 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 UGT1A8Q9HAW9 530 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 RAB6BQ9NRW1 208 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 COX16Q9P0S2 106 aa14.3□□□□□ -0.12
BNIP3-202ENST00000540159 ZMYND8Q9ULU4 1186 aaPredicted RBP14.3□□□□□ -0.12
BNIP3-202ENST00000540159 PIGRP01833 764 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 ZNF286BP0CG31 522 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 PDGFRAP16234 1089 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 HADHQ16836 314 aaKnown RBP14.29□□□□□ -0.12
BNIP3-202ENST00000540159 METTL7BQ6UX53 244 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 PPM1NQ8N819 430 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 C7orf31Q8N865 590 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 PGLYRP2Q96PD5 576 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 CEP41Q9BYV8 373 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 MAGED2Q9UNF1 606 aaPredicted RBP14.29□□□□□ -0.12
BNIP3-202ENST00000540159 CNTN6Q9UQ52 1028 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 HES2Q9Y543 173 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 RLFQ13129 1914 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 TRIP11Q15643 1979 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 MCF2LO15068 1137 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 ENTPD5O75356 428 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 USP2O75604 605 aaPredicted RBP14.29□□□□□ -0.12
BNIP3-202ENST00000540159 UNC5CO95185 931 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 APRTP07741 180 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 TFE3P19532 575 aaPredicted RBP14.29□□□□□ -0.12
BNIP3-202ENST00000540159 SLC8A1P32418 973 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 PHKA2P46019 1235 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 OAZ1P54368 228 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 FAAP100Q0VG06 881 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 MPZL3Q6UWV2 235 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 LBX2Q6XYB7 198 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 SCUBE3Q8IX30 993 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 PPIL6Q8IXY8 311 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 PDIK1LQ8N165 341 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 UBR7Q8N806 425 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 SLC4A11Q8NBS3 891 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 TTC8Q8TAM2 541 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 DENND1AQ8TEH3 1009 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 FAF2Q96CS3 445 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 APOL6Q9BWW8 343 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 ARMCX1Q9P291 453 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 SNCAIPQ9Y6H5 919 aa14.29□□□□□ -0.12
BNIP3-202ENST00000540159 KCNN4O15554 427 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 STAG3L1P0CL83 205 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 TXNP10599 105 aaKnown RBP14.28□□□□□ -0.12
BNIP3-202ENST00000540159 PYGBP11216 843 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 EIF4BP23588 611 aaKnown RBP14.28□□□□□ -0.12
BNIP3-202ENST00000540159 RFC5P40937 340 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 PTPN11Q06124 597 aaPredicted RBP14.28□□□□□ -0.12
BNIP3-202ENST00000540159 ZPBP2Q6X784 338 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 TTC7BQ86TV6 843 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 SERAC1Q96JX3 654 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 GPR20Q99678 358 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 TMEM134Q9H6X4 195 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 SLC17A6Q9P2U8 582 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 IKBKGQ9Y6K9 419 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 LAMA2P24043 3122 aaKnown RBP14.28□□□□□ -0.12
BNIP3-202ENST00000540159 MGAMO43451 1857 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 ITGAVP06756 1048 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 BGNP21810 368 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 YWHAEP62258 255 aaKnown RBP14.28□□□□□ -0.12
BNIP3-202ENST00000540159 CA9Q16790 459 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 NLRP9Q7RTR0 991 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 ATP11CQ8NB49 1132 aa14.28□□□□□ -0.12
BNIP3-202ENST00000540159 CCDC110Q8TBZ0 833 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms