RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 TICRRQ7Z2Z1 1910 aa6.42□□□□□ -1.38
CPSF7-219ENST00000539952 GON4LQ3T8J9 2241 aa6.42□□□□□ -1.38
CPSF7-219ENST00000539952 USP9XQ93008 2570 aaPredicted RBP6.42□□□□□ -1.38
CPSF7-219ENST00000539952 ATG2BQ96BY7 2078 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 ASCC3Q8N3C0 2202 aaKnown RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 A0A1W2PQ27 194 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 A0A1W2PQ64 194 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 A0A1W2PQD8 194 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 TTC26A0AVF1 554 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 OTOL1A6NHN0 477 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 PATE3B3GLJ2 98 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 AP5Z1O43299 807 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 CBFA2T2O43439 604 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 PFKFB2O60825 505 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 OPHN1O60890 802 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 LARGE1O95461 756 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 PRAMEF12O95522 483 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 F11P03951 625 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 CYP11A1P05108 521 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 HAPLN1P10915 354 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 ODC1P11926 461 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 LILRA4P59901 499 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 MRPS21P82921 87 aaKnown RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 CYP4F8P98187 520 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 FAM160A1Q05DH4 1040 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 GFPT1Q06210 699 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 SLC14A1Q13336 389 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 TRIM29Q14134 588 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 IQCB1Q15051 598 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 CRY1Q16526 586 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 DUOXA1Q1HG43 343 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 HSF5Q4G112 596 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 TEX35Q5T0J7 233 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 TRIM68Q6AZZ1 485 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 ZPBP2Q6X784 338 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 ZNF771Q7L3S4 317 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 LUZP1Q86V48 1076 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 DCP1BQ8IZD4 617 aaKnown RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 CHCHD4Q8N4Q1 142 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 OLIG1Q8TAK6 271 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 USP33Q8TEY7 942 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 OSCP1Q8WVF1 389 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 ATP2A3Q93084 1043 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 ZBTB45Q96K62 511 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 SPACA7Q96KW9 195 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 SENP8Q96LD8 212 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 DRC1Q96MC2 740 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 SEPT5Q99719 369 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 TIPINQ9BVW5 301 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 TSPYL1Q9H0U9 437 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 TMEM60Q9H2L4 133 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 CCDC86Q9H6F5 360 aaKnown RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 POLMQ9NP87 494 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 POLR3BQ9NW08 1133 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 DUS2Q9NX74 493 aaKnown RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 CALCOCO1Q9P1Z2 691 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 UXTQ9UBK9 157 aaPredicted RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 KLK13Q9UKR3 277 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 KIAA1024Q9UPX6 916 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 INVSQ9Y283 1065 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 PCDHB9Q9Y5E1 797 aa6.41□□□□□ -1.38
CPSF7-219ENST00000539952 GCN1Q92616 2671 aaKnown RBP6.41□□□□□ -1.38
CPSF7-219ENST00000539952 TRIP11Q15643 1979 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 CEP295Q9C0D2 2601 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 A0A0A0MRY4 1105 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 SPAARA0A1B0GVQ0 90 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 GOLGA6L9A6NEM1 432 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 MYMKA6NI61 221 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 H0YCG3 227 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 ABLIM1O14639 778 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 ADRB2P07550 413 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 SYPP08247 313 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 SERPINF2P08697 491 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 USP17L7P0C7H9 530 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 SKILP12757 684 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 FDPSP14324 419 aaKnown RBP6.4□□□□□ -1.38
CPSF7-219ENST00000539952 ARSAP15289 507 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 ENGP17813 658 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 SCP2P22307 547 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 MCM7P33993 719 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 CCT6AP40227 531 aaKnown RBP6.4□□□□□ -1.38
CPSF7-219ENST00000539952 P2RY2P41231 377 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 MATR3P43243 847 aaKnown RBP eCLIP6.4□□□□□ -1.38
CPSF7-219ENST00000539952 MAPK8P45983 427 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 IFNAR2P48551 515 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 NLRP12P59046 1061 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 PPP2R3AQ06190 1150 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 MCL1Q07820 350 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 SCAPQ12770 1279 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 RESTQ13127 1097 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 MCM6Q14566 821 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 MTF1Q14872 753 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 SAFBQ15424 915 aaKnown RBP eCLIP6.4□□□□□ -1.38
CPSF7-219ENST00000539952 CAMK4Q16566 473 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 NFE2Q16621 373 aaPredicted RBP6.4□□□□□ -1.38
CPSF7-219ENST00000539952 KMT5BQ4FZB7 885 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 SLC39A12Q504Y0 691 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 SPATA1Q5VX52 437 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 TXNDC8Q6A555 127 aa6.4□□□□□ -1.38
CPSF7-219ENST00000539952 ADALQ6DHV7 355 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms