RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 NAT16Q8N8M0 369 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 TXNDC5Q8NBS9 432 aaKnown RBP8.09□□□□□ -1.11
GNE-205ENST00000539815 SPC24Q8NBT2 197 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 RNF139Q8WU17 664 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 LGMNQ99538 433 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 DDX43Q9NXZ2 648 aaKnown RBP8.09□□□□□ -1.11
GNE-205ENST00000539815 DPP3Q9NY33 737 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 OBP2AQ9NY56 170 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 BLOC1S6Q9UL45 172 aa8.09□□□□□ -1.11
GNE-205ENST00000539815 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.09□□□□□ -1.11
GNE-205ENST00000539815 SCAMP3O14828 347 aaKnown RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 CER1O95813 267 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 DLATP10515 647 aaKnown RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 TRAPPC10P48553 1259 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 GALK1P51570 392 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 PTGDRQ13258 359 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 C6orf118Q5T5N4 469 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 RRAGBQ5VZM2 374 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 SLC8B1Q6J4K2 584 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 GALNT15Q8N3T1 639 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 ARL14EPQ8N8R7 260 aaPredicted RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 SHKBP1Q8TBC3 707 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 RNF34Q969K3 372 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 MBOAT7Q96N66 472 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 CHCHD3Q9NX63 227 aaKnown RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 CENPFP49454 3210 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 A0A0G2JMZ2 1700 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 PTPRQQ9UMZ3 2332 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 LAMB1P07942 1786 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 ANKRD65E5RJM6 399 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 SMC2O95347 1197 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 CHRNB1P11230 501 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 CSRP1P21291 193 aaKnown RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 NMT1P30419 496 aaKnown RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 CLK2P49760 499 aaKnown RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 ZNF33AQ06730 810 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 RILPL1Q5EBL4 403 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 CATSPER3Q86XQ3 398 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 ZNF579Q8NAF0 562 aaKnown RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 C18orf25Q96B23 403 aaPredicted RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 SMG9Q9H0W8 520 aaKnown RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 FZD8Q9H461 694 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 XPNPEP1Q9NQW7 623 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 DNAJC17Q9NVM6 304 aaKnown RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 IPO11Q9UI26 975 aaKnown RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 A8MXQ7 604 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 E9PMD0 336 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 IL18RAPO95256 599 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 LYPLA2O95372 231 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 PLCG1P19174 1290 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 ACOT2P49753 483 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 CACNB1Q02641 598 aaPredicted RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 ORC2Q13416 577 aaPredicted RBP8.08□□□□□ -1.12
GNE-205ENST00000539815 KCNC3Q14003 757 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 STK38Q15208 465 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 PLK5Q496M5 336 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 SERPINA13PQ6UXR4 307 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 ZPBP2Q6X784 338 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 RNF19BQ6ZMZ0 732 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 SV2BQ7L1I2 683 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 FAM124AQ86V42 546 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 ACCSQ96QU6 501 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 SEPT3Q9UH03 358 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 CYP8B1Q9UNU6 501 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 LIMCH1Q9UPQ0 1083 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 DOLKQ9UPQ8 538 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 LAMA3Q16787 3333 aa8.08□□□□□ -1.12
GNE-205ENST00000539815 TMEM189-UBE2V1I3L0A0 370 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 DCLK1O15075 740 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 SOAT2O75908 522 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 PDGFRBP09619 1106 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 LINC00271P0C7V0 271 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 PDCP20941 246 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 MUTP22033 750 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 TRIM68Q6AZZ1 485 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 CSGALNACT2Q8N6G5 542 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 ETNPPLQ8TBG4 499 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 ZNF483Q8TF39 744 aaPredicted RBP8.07□□□□□ -1.12
GNE-205ENST00000539815 TNIP3Q96KP6 325 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 HSPA12BQ96MM6 686 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 SLX1AQ9BQ83 275 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 LSM14BQ9BX40 385 aaKnown RBP8.07□□□□□ -1.12
GNE-205ENST00000539815 BBS2Q9BXC9 721 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 NFKBIZQ9BYH8 718 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 ECT2Q9H8V3 914 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 FARP1Q9Y4F1 1045 aaPredicted RBP8.07□□□□□ -1.12
GNE-205ENST00000539815 ZNF462Q96JM2 2506 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 EPN2O95208 641 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 MOCS3O95396 460 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 PLA2G4BP0C869 781 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 PLS3P13797 630 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 MATKP42679 507 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 ARRB1P49407 418 aaPredicted RBP8.07□□□□□ -1.12
GNE-205ENST00000539815 IRX4P78413 519 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 MRPS21P82921 87 aaKnown RBP8.07□□□□□ -1.12
GNE-205ENST00000539815 WSCD1Q658N2 575 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 IL27RAQ6UWB1 636 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 DYMQ7RTS9 669 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 MON1AQ86VX9 555 aa8.07□□□□□ -1.12
GNE-205ENST00000539815 TRIML1Q8N9V2 468 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms