RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 SLC35C1Q96A29 364 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 SLC22A12Q96S37 553 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 KCNK16Q96T55 309 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 TTLL2Q9BWV7 592 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 CYP3A43Q9HB55 503 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 TRPC7Q9HCX4 862 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 LTB4R2Q9NPC1 389 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 DLGAP2Q9P1A6 1054 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 ATP8B3O60423 1300 aa16.65■□□□□ 0.26
CIT-210ENST00000539413 C2orf78A6NCI8 922 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 GLULP15104 373 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 STX17P56962 302 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 IFRD2Q12894 506 aaPredicted RBP16.64■□□□□ 0.25
CIT-210ENST00000539413 ARHGAP29Q52LW3 1261 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 FILIP1Q7Z7B0 1213 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 C12orf29Q8N999 325 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 RIN3Q8TB24 985 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 SLC2A14Q8TDB8 520 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 CSGALNACT1Q8TDX6 532 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 WHAMMQ8TF30 809 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 SMARCD1Q96GM5 515 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 CEP63Q96MT8 703 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 CYP2S1Q96SQ9 504 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 KRT82Q9NSB4 513 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 FAM49BQ9NUQ9 324 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 TDP1Q9NUW8 608 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 EHD2Q9NZN4 543 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 KIAA1468Q9P260 1216 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 PIAS3Q9Y6X2 628 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 TICRRQ7Z2Z1 1910 aa16.64■□□□□ 0.25
CIT-210ENST00000539413 DENND4CQ5VZ89 1909 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 TRAV19A0A0A6YYK7 116 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 BICDL2A1A5D9 508 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 FAM170BA6NMN3 283 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 CILPO75339 1184 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 AP1G2O75843 785 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 TARSP26639 723 aaKnown RBP16.63■□□□□ 0.25
CIT-210ENST00000539413 PAK1Q13153 545 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 CCDC40Q4G0X9 1142 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 FOXR2Q6PJQ5 311 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 ZNF852Q6ZMS4 543 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 FRMD5Q7Z6J6 570 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 NUP93Q8N1F7 819 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 ARL14EPQ8N8R7 260 aaPredicted RBP16.63■□□□□ 0.25
CIT-210ENST00000539413 TRIML1Q8N9V2 468 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 ZMIZ2Q8NF64 920 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 TTC8Q8TAM2 541 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 TATDN2Q93075 761 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 NT5C1AQ9BXI3 368 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 KIF9Q9HAQ2 790 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 METTL14Q9HCE5 456 aaKnown RBP16.63■□□□□ 0.25
CIT-210ENST00000539413 DMAP1Q9NPF5 467 aaPredicted RBP16.63■□□□□ 0.25
CIT-210ENST00000539413 FAM86C1Q9NVL1 165 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 TRPM5Q9NZQ8 1165 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 GCNT4Q9P109 453 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 COQ4Q9Y3A0 265 aa16.63■□□□□ 0.25
CIT-210ENST00000539413 GREB1Q4ZG55 1949 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 BEST1O76090 585 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 CKMP06732 381 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 USP17L7P0C7H9 530 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 ADORA2BP29275 332 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 SOX9P48436 509 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 TNK2Q07912 1038 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 TAF10Q12962 218 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 ZNF268Q14587 947 aaPredicted RBP16.62■□□□□ 0.25
CIT-210ENST00000539413 ZNF394Q53GI3 561 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 WDR44Q5JSH3 913 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 NELL2Q99435 816 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 PHOX2BQ99453 314 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 SMOQ99835 787 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 ARID3AQ99856 593 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 OSBPL6Q9BZF3 934 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 GKN1Q9NS71 199 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 THG1LQ9NWX6 298 aaKnown RBP16.62■□□□□ 0.25
CIT-210ENST00000539413 GTSE1Q9NYZ3 720 aa16.62■□□□□ 0.25
CIT-210ENST00000539413 NDRG2Q9UN36 371 aaKnown RBP16.62■□□□□ 0.25
CIT-210ENST00000539413 ZNF840PA6NDX5 716 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 MAN2B1O00754 1011 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 TNFRSF10BO14763 440 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 HDCP19113 662 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 YWHAQP27348 245 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 FMO5P49326 533 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 KPNA1P52294 538 aaPredicted RBP16.61■□□□□ 0.25
CIT-210ENST00000539413 SLC5A3P53794 718 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 MAP3K7CLP57077 242 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 ANGPT1Q15389 498 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 CLEC17AQ6ZS10 378 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 ZNF687Q8N1G0 1237 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 TTC16Q8NEE8 873 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 SCAMP5Q8TAC9 235 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 FAM3CQ92520 227 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 ATOH1Q92858 354 aaPredicted RBP16.61■□□□□ 0.25
CIT-210ENST00000539413 CYFIP2Q96F07 1278 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 FAXDC2Q96IV6 333 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 SLITRK1Q96PX8 696 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 HNRNPABQ99729 332 aaKnown RBP16.61■□□□□ 0.25
CIT-210ENST00000539413 CLSTN2Q9H4D0 955 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 CSNK1G1Q9HCP0 422 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 CISHQ9NSE2 258 aa16.61■□□□□ 0.25
CIT-210ENST00000539413 MRPS17Q9Y2R5 130 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms