RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 HNRNPA1P09651 372 aaKnown RBP eCLIP10.8□□□□□ -0.68
CLPB-210ENST00000539148 CSH1P0DML2 217 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 CSH2P0DML3 217 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 HAPLN1P10915 354 aaPredicted RBP10.8□□□□□ -0.68
CLPB-210ENST00000539148 BDNFP23560 247 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 HOXA9P31269 272 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 EIF4A3P38919 411 aaKnown RBP10.8□□□□□ -0.68
CLPB-210ENST00000539148 PLA2G4AP47712 749 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 PPP3CCP48454 512 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 TAF3Q5VWG9 929 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 RNF19BQ6ZMZ0 732 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 NOP9Q86U38 636 aaKnown RBP10.8□□□□□ -0.68
CLPB-210ENST00000539148 ERICH1Q86X53 443 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 PALB2Q86YC2 1186 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 GLYCTKQ8IVS8 523 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 SCN4BQ8IWT1 228 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 FUKQ8N0W3 1084 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 SIX6OS1Q8N1H7 587 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 ARHGAP18Q8N392 663 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 TMEM130Q8N3G9 435 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 C12orf29Q8N999 325 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 LEMD2Q8NC56 503 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 GDPD5Q8WTR4 605 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 ZNF592Q92610 1267 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 SPATA17Q96L03 361 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 TWNKQ96RR1 684 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 EIF3CQ99613 913 aaKnown RBP10.8□□□□□ -0.68
CLPB-210ENST00000539148 SEPT5Q99719 369 aaPredicted RBP10.8□□□□□ -0.68
CLPB-210ENST00000539148 B3GNT5Q9BYG0 378 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 CYP4F11Q9HBI6 524 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 CSNK1G1Q9HCP0 422 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 MRPL47Q9HD33 250 aaKnown RBP10.8□□□□□ -0.68
CLPB-210ENST00000539148 ADAMTS1Q9UHI8 967 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 PLXNA3P51805 1871 aa10.8□□□□□ -0.68
CLPB-210ENST00000539148 WDR27A2RRH5 827 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 RRP9O43818 475 aaKnown RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 NDUFA10O95299 355 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 MMEP08473 750 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 PNMA6AP0CW24 399 aaPredicted RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 CCDC130P13994 396 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 RPL17P18621 184 aaKnown RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 POU3F3P20264 500 aaPredicted RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 IGFBP6P24592 240 aaPredicted RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 CDH5P33151 784 aaPredicted RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 PSEN1P49768 467 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 KIF11P52732 1056 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 GNG11P61952 73 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 CENPCQ03188 943 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 DUSP4Q13115 394 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 ORC1Q13415 861 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 PABPC1LQ4VXU2 614 aaKnown RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 PPM1LQ5SGD2 360 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 CCDC122Q5T0U0 273 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 HGSNATQ68CP4 663 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 ACAD10Q6JQN1 1059 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 ALKBH5Q6P6C2 394 aaKnown RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 SYT10Q6XYQ8 523 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 TOGARAM2Q6ZUX3 1019 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 NUP93Q8N1F7 819 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 KREMEN2Q8NCW0 462 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 C1orf131Q8NDD1 294 aaKnown RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 PDZD8Q8NEN9 1154 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 AUTS2Q8WXX7 1259 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 CTNNBL1Q8WYA6 563 aaPredicted RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 KCTD13Q8WZ19 329 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 TFAP2BQ92481 460 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 DDX1Q92499 740 aaKnown RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 C18orf8Q96DM3 657 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 ZNF512Q96ME7 567 aaPredicted RBP10.79□□□□□ -0.68
CLPB-210ENST00000539148 PGLYRP2Q96PD5 576 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 SLITRK1Q96PX8 696 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 GCNAQ96QF7 691 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 PKMYT1Q99640 499 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 ST7Q9NRC1 585 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 ZDHHC7Q9NXF8 308 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 ARHGAP20Q9P2F6 1191 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 ZMYM5Q9UJ78 669 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 INTUQ9ULD6 942 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 SCINQ9Y6U3 715 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 GREB1Q4ZG55 1949 aa10.79□□□□□ -0.68
CLPB-210ENST00000539148 MYO16Q9Y6X6 1858 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 USP27XA6NNY8 438 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 HIDE1A8MVS5 230 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 TGM5O43548 720 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 CLASP2O75122 1294 aaKnown RBP10.78□□□□□ -0.68
CLPB-210ENST00000539148 ARHGEF15O94989 841 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 CYP1A1P04798 512 aaPredicted RBP10.78□□□□□ -0.68
CLPB-210ENST00000539148 OR4Q2P0C623 313 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 HOXB8P17481 243 aaPredicted RBP10.78□□□□□ -0.68
CLPB-210ENST00000539148 DNAJB1P25685 340 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 SCNN1AP37088 669 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 GPD2P43304 727 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 CLCN4P51793 760 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 MAP3K7CLP57077 242 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 FMO1Q01740 532 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 C1QBPQ07021 282 aaKnown RBP10.78□□□□□ -0.68
CLPB-210ENST00000539148 PDE4CQ08493 712 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 IFI16Q16666 785 aaKnown RBP10.78□□□□□ -0.68
CLPB-210ENST00000539148 DUSP6Q16828 381 aa10.78□□□□□ -0.68
CLPB-210ENST00000539148 CLEC16AQ2KHT3 1053 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms