RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 CYTH4Q9UIA0 394 aa14.94□□□□□ -0.02
CD4-208ENST00000538827 ANKRD62A6NC57 917 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 TULP2O00295 520 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 PJA2O43164 708 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 BUB1O43683 1085 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 EFEMP2O95967 443 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 BDNFP23560 247 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 GPD2P43304 727 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 NOP2P46087 812 aaKnown RBP14.93□□□□□ -0.02
CD4-208ENST00000538827 MAP3K7CLP57077 242 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 PLCB3Q01970 1234 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 DSG1Q02413 1049 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 MRPL58Q14197 206 aaKnown RBP14.93□□□□□ -0.02
CD4-208ENST00000538827 PTPN20Q4JDL3 420 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 LLGL2Q6P1M3 1020 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 FAM171BQ6P995 826 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 LRRTM3Q86VH5 581 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 WDTC1Q8N5D0 677 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 C16orf45Q96MC5 204 aaPredicted RBP14.93□□□□□ -0.02
CD4-208ENST00000538827 CPXM1Q96SM3 734 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 PKMYT1Q99640 499 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 NKX2-4Q9H2Z4 354 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 CTTNBP2NLQ9P2B4 639 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 TJP2Q9UDY2 1190 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 CHORDC1Q9UHD1 332 aaPredicted RBP14.93□□□□□ -0.02
CD4-208ENST00000538827 INTUQ9ULD6 942 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 YBX2Q9Y2T7 364 aaKnown RBP14.93□□□□□ -0.02
CD4-208ENST00000538827 PAXBP1Q9Y5B6 917 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 PCDHB5Q9Y5E4 795 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 PCDHA11Q9Y5I1 949 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 CDY1Q9Y6F8 540 aa14.93□□□□□ -0.02
CD4-208ENST00000538827 COL4A4P53420 1690 aaPredicted RBP14.93□□□□□ -0.02
CD4-208ENST00000538827 XIRP2A4UGR9 3374 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 GOLGA8SH3BPF8 625 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 XPO1O14980 1071 aaKnown RBP14.92□□□□□ -0.02
CD4-208ENST00000538827 MOCS3O95396 460 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 ABL1P00519 1130 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 ERBB2P04626 1255 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 MYBL1P10243 752 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 BMPR1AP36894 532 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 GPC5P78333 572 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
CD4-208ENST00000538827 NFE2Q16621 373 aaPredicted RBP14.92□□□□□ -0.02
CD4-208ENST00000538827 PKDCCQ504Y2 493 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 DNAJC24Q6P3W2 148 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 RSPO2Q6UXX9 243 aaPredicted RBP14.92□□□□□ -0.02
CD4-208ENST00000538827 CLEC20AQ6ZU45 233 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 PAQR9Q6ZVX9 377 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 SPRED2Q7Z698 418 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 SCN4BQ8IWT1 228 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 FBXO22Q8NEZ5 403 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 RFFLQ8WZ73 363 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 DUSP16Q9BY84 665 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 OXCT2Q9BYC2 517 aaPredicted RBP14.92□□□□□ -0.02
CD4-208ENST00000538827 ZBP1Q9H171 429 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 SLC28A3Q9HAS3 691 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 ENTPD7Q9NQZ7 604 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 MRPL17Q9NRX2 175 aaKnown RBP14.92□□□□□ -0.02
CD4-208ENST00000538827 KCND1Q9NSA2 647 aa14.92□□□□□ -0.02
CD4-208ENST00000538827 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.91□□□□□ -0.02
CD4-208ENST00000538827 MTMR11A4FU01 709 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 TMEM110-MUSTN1A8MSY1 372 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 E5RJQ4 531 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 ADAM12O43184 909 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 KIF5CO60282 957 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 LCP1P13796 627 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 MMP8P22894 467 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 RRM1P23921 792 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 CACNA2D1P54289 1103 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 ROR1Q01973 937 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 TFF2Q03403 129 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 PTP4A2Q12974 167 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 PLPP4Q5VZY2 271 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 OR6B2Q6IFH4 312 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 TMC7Q7Z402 723 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 TGS1Q96RS0 853 aaKnown RBP14.91□□□□□ -0.02
CD4-208ENST00000538827 SEPT5Q99719 369 aaPredicted RBP14.91□□□□□ -0.02
CD4-208ENST00000538827 SMOQ99835 787 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 C11orf84Q9BUA3 381 aaPredicted RBP14.91□□□□□ -0.02
CD4-208ENST00000538827 SELENOOQ9BVL4 669 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 NUP85Q9BW27 656 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 MIS12Q9H081 205 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 ALG13Q9NP73 1137 aaKnown RBP14.91□□□□□ -0.02
CD4-208ENST00000538827 DMAP1Q9NPF5 467 aaPredicted RBP14.91□□□□□ -0.02
CD4-208ENST00000538827 CHST7Q9NS84 486 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 STK39Q9UEW8 545 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 STRIP2Q9ULQ0 834 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 COG5Q9UP83 839 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 BACE2Q9Y5Z0 518 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 DUSP10Q9Y6W6 482 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 PLXNA3P51805 1871 aa14.91□□□□□ -0.02
CD4-208ENST00000538827 LPXNO60711 386 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 BEST1O76090 585 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 GJB6O95452 261 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 CTSAP10619 480 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 CYP2F1P24903 491 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 OR1D2P34982 312 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 GRIK1P39086 918 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 PLA2G4AP47712 749 aa14.9□□□□□ -0.02
CD4-208ENST00000538827 KCNQ1P51787 676 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms